miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00641;mir-154;ABRQ01054376.1/1652-1731 9813:Procavia capensis
(cape rock hyrax)
Length = 80
Score = 143 bits (72), Expect = 4e-34
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 1 tacttgaagagaagttgttcgtggtggattcgctttacttgtgacgaatcattcacggac 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3 tacttgaagagaagttgttcgtggtggattcgctttacttatgacgaatcattcacggac 62
Query: 61 aacacttttttcagta 76
||||||||||||||||
Sbjct: 63 aacacttttttcagta 78
>RF00641;mir-154;ABRQ01054377.1/1437-1516 9813:Procavia capensis
(cape rock hyrax)
Length = 80
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 29 ttcgctttacttgtgacgaatcattcacgg 58
||||||||| |||||||||||||| |||||
Sbjct: 31 ttcgctttatttgtgacgaatcatacacgg 60
>RF00641;mir-154;ABRR01391432.1/49-127 30538:Lama pacos (alpaca)
Length = 79
Score = 42.1 bits (21), Expect = 0.001
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 20 cgtggtggattcgctttacttgtgacgaatcattcacggacaacacttttttcagta 76
||||| |||||| ||||||| || |||| |||| ||||||||| |||||||||||
Sbjct: 21 cgtgggggattcactttactgaggaggaatgattcgcggacaacaattttttcagta 77
