miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00641;mir-154;AAGU02626700.1/154-230 9785:Loxodonta africana
(African savanna elephant)
Length = 77
Score = 129 bits (65), Expect = 6e-30
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 2 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 61
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ggtactcggggagaggttacccgagcaactttgcatctggacgacgaatgttgctcggtg 60
Query: 62 aaccccttttcggtatc 78
|||||||| ||||||||
Sbjct: 61 aaccccttctcggtatc 77
>RF00641;mir-154;AAKN02051949.1/132763-132839 10141:Cavia
porcellus (domestic guinea pig)
Length = 77
Score = 113 bits (57), Expect = 3e-25
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 2 ggtactcggagagaggttacccgagcaactttgcatctggaggacgaatgttgctcggtg 61
||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 1 ggtacccggagagaggttacccaagcaactttgcatctgaacaacgaatgttgctcggtg 60
Query: 62 aaccccttttcggtatc 78
|||||||||||||||||
Sbjct: 61 aaccccttttcggtatc 77
