miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33370_bta-mir-425:mirbase
Length = 87
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 aaagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aaagcgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 61
Query: 61 atgtcgtgtccgcccagtgctcttt 85
|||||||||||||||||||||||||
Sbjct: 62 atgtcgtgtccgcccagtgctcttt 86
>33371_bta-mir-425:mirbase
Length = 87
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 aaagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aaagcgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 61
Query: 61 atgtcgtgtccgcccagtgctcttt 85
|||||||||||||||||||||||||
Sbjct: 62 atgtcgtgtccgcccagtgctcttt 86
>32909_rno-mir-425:mirbase
Length = 83
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 3 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaat 60
Query: 63 gtcgtgtccgcccagtgctcttt 85
||||||||||||||||||||||
Sbjct: 61 atcgtgtccgcccagtgctcttt 83
>28648_hsa-mir-425:mirbase
Length = 87
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1 aaagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 60
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 aaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggga 61
Query: 61 atgtcgtgtccgcccagtgctcttt 85
|||||||||||||||||||||||||
Sbjct: 62 atgtcgtgtccgcccagtgctcttt 86
>30372_ptr-mir-425:mirbase
Length = 86
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1 aaagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 60
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 aaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggga 61
Query: 61 atgtcgtgtccgcccagtgctcttt 85
|||||||||||||||||||||||||
Sbjct: 62 atgtcgtgtccgcccagtgctcttt 86
>31002_ppy-mir-425:mirbase
Length = 87
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1 aaagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 60
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 aaagcgctttggaatgacacgatcactcccgttgagtgggcacccgagaagccatcggga 61
Query: 61 atgtcgtgtccgcccagtgctcttt 85
|||||||||||||||||||||||||
Sbjct: 62 atgtcgtgtccgcccagtgctcttt 86
>34092_ssc-mir-425:mirbase
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 2 aagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaa 61
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aagtgctttggaatgacacgatcactcccgttgagtgggcacccaagtagccatcgggaa 60
Query: 62 tgtcgtgtccgcccagtgct 81
||||||||||||||||||||
Sbjct: 61 tgtcgtgtccgcccagtgct 80
>34093_ssc-mir-425:mirbase
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 2 aagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaa 61
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aagtgctttggaatgacacgatcactcccgttgagtgggcacccaagtagccatcgggaa 60
Query: 62 tgtcgtgtccgcccagtgct 81
||||||||||||||||||||
Sbjct: 61 tgtcgtgtccgcccagtgct 80
>27901_mml-mir-425:mirbase
Length = 87
Score = 145 bits (73), Expect = 6e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 1 aaagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 60
|||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 2 aaagcgctttggaatgacacgatcactcccgttgagtgggcccccgagaagccatcggga 61
Query: 61 atgtcgtgtccgcccagtgctcttt 85
|||||||||||||||||||||||||
Sbjct: 62 atgtcgtgtccgcccagtgctcttt 86
>26842_cfa-mir-425:mirbase
Length = 63
Score = 125 bits (63), Expect = 5e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 13 aatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtcgtgtccg 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtcgtgtccg 60
Query: 73 ccc 75
|||
Sbjct: 61 ccc 63
>27449_mdo-mir-425:mirbase
Length = 85
Score = 121 bits (61), Expect = 8e-29
Identities = 79/85 (92%)
Strand = Plus / Plus
Query: 1 aaagtgctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcggga 60
|||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 1 aaagtgctttggaatgacacgatcactcccgttgagcggacagccaagaagccatcggga 60
Query: 61 atgtcgtgtccgcccagtgctcttt 85
|| ||||||||| ||| ||||||||
Sbjct: 61 atatcgtgtccgtccaatgctcttt 85
>31551_oan-mir-425:mirbase
Length = 103
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 6 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtc 65
||||||||||||||||||||||||||||||| || || ||||||||||||||||||| ||
Sbjct: 13 gctttggaatgacacgatcactcccgttgagcggacagccaagaagccatcgggaatatc 72
Query: 66 gtgtccgcccagtgctcttt 85
||||||| ||| |||||||
Sbjct: 73 gtgtccgtccaaagctcttt 92
>26530_tgu-mir-425:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 6 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtc 65
|||||||||||||||||||||||||| |||| ||| ||| |||||||||| |||||
Sbjct: 9 gctttggaatgacacgatcactcccgctgagccagcagccagagagccatcggggatgtc 68
Query: 66 gtgtc 70
|||||
Sbjct: 69 gtgtc 73
>26531_tgu-mir-425:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 6 gctttggaatgacacgatcactcccgttgagtgggcacccaagaagccatcgggaatgtc 65
|||||||||||||||||||||||||| |||| ||| ||| |||||||||| |||||
Sbjct: 9 gctttggaatgacacgatcactcccgctgagccagcagccagagagccatcggggatgtc 68
Query: 66 gtgtc 70
|||||
Sbjct: 69 gtgtc 73
>25855_xtr-mir-425:mirbase
Length = 77
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 9 ttggaatgacacgatcactcccgttgag 36
||||||||||||||||||||||||||||
Sbjct: 4 ttggaatgacacgatcactcccgttgag 31
