miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus musculus
GN=Rtl1 PE=2 SV=1
Length = 1744
Score = 53.1 bits (126), Expect = 5e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -3
Query: 73 LPTDLLQEVEEPSSGPHQEMQELP 2
LPTDLLQEVEEPSSGPHQEMQELP
Sbjct: 126 LPTDLLQEVEEPSSGPHQEMQELP 149
Score = 51.2 bits (121), Expect = 2e-06
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3
Query: 73 LPTDLLQEVEEPSSGPHQEMQELP 2
LPT+LLQEVEEPSSGPHQEMQELP
Sbjct: 104 LPTNLLQEVEEPSSGPHQEMQELP 127
Score = 49.3 bits (116), Expect = 7e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -3
Query: 73 LPTDLLQEVEEPSSGPHQEMQELP 2
LPTDLL+EVEEPSSGP+QEMQELP
Sbjct: 148 LPTDLLREVEEPSSGPYQEMQELP 171
Score = 49.3 bits (116), Expect = 7e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -3
Query: 73 LPTDLLQEVEEPSSGPHQEMQELP 2
LPTDLL+EVEEPSSGP+QEMQELP
Sbjct: 170 LPTDLLREVEEPSSGPYQEMQELP 193
Score = 49.3 bits (116), Expect = 7e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -3
Query: 73 LPTDLLQEVEEPSSGPHQEMQELP 2
LPTDLL+EVEEPSSGP+QEMQELP
Sbjct: 192 LPTDLLREVEEPSSGPYQEMQELP 215
Score = 49.3 bits (116), Expect = 7e-06
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -3
Query: 73 LPTDLLQEVEEPSSGPHQEMQELP 2
LPTDLL+EVEEPSSGP+QEMQELP
Sbjct: 214 LPTDLLREVEEPSSGPYQEMQELP 237
