miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32916_rno-mir-449c:mirbase
Length = 99
Score = 149 bits (75), Expect = 5e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 11 gtgggtgtgtcaggcaggcagtgcattgctagctggctgttagaactttatcccaacagt 70
||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5 gtgggtgtgtcagacaggcagtgcattgctagctggctgttagaacttcgtcccaacagt 64
Query: 71 tgctagctgcactaccctctgctgcactcagaagc 105
||||||||||||||||||||||||||| ||||||
Sbjct: 65 ggctagctgcactaccctctgctgcacttagaagc 99
>32917_rno-mir-449c:mirbase
Length = 99
Score = 149 bits (75), Expect = 5e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 11 gtgggtgtgtcaggcaggcagtgcattgctagctggctgttagaactttatcccaacagt 70
||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5 gtgggtgtgtcagacaggcagtgcattgctagctggctgttagaacttcgtcccaacagt 64
Query: 71 tgctagctgcactaccctctgctgcactcagaagc 105
||||||||||||||||||||||||||| ||||||
Sbjct: 65 ggctagctgcactaccctctgctgcacttagaagc 99
>33379_bta-mir-449c:mirbase
Length = 106
Score = 58.0 bits (29), Expect = 1e-09
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 16 tgtgtcaggcaggcagtgcattgctagctggctgttagaactttatcccaacagttgcta 75
||||||||| ||||||||||| |||||||||||||| || || | |||||||||||
Sbjct: 13 tgtgtcaggtaggcagtgcatctctagctggctgttaaaatttctttttaacagttgcta 72
Query: 76 gctgcactaccctctgctgca 96
| |||||| ||||||| ||||
Sbjct: 73 gttgcactcccctctgttgca 93
>28656_hsa-mir-449c:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 65 aacagttgctagctgcactaccctctgctgcactcagaagc 105
|||||||||||| |||||| | ||||| |||| ||||||||
Sbjct: 52 aacagttgctagttgcactcctctctgttgcattcagaagc 92
>31555_oan-mir-449c:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 27 ggcagtgcattgctagctggctgtt 51
|||||||| ||||||||||||||||
Sbjct: 23 ggcagtgctttgctagctggctgtt 47
