miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00839;mir-452;AAGU02398934.1/1672-1588 9785:Loxodonta africana
(African savanna elephant)
Length = 85
Score = 137 bits (69), Expect = 3e-32
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 gctaagcagttacaactgtttgcagaggaaactgagactttataactatgtctcagtctc 60
|||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1 gctaagcacttacaactgtttgcagaggaaactgagactttgtagctatgtctcagtctc 60
Query: 61 atctgcaaagaggtaagtgctttgc 85
||||||||||| |||||||||||||
Sbjct: 61 atctgcaaagaagtaagtgctttgc 85
>RF00839;mir-452;AAWR02040592.1/88041-87978 9796:Equus caballus
(horse)
Length = 64
Score = 73.8 bits (37), Expect = 3e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 gctaagcagttacaactgtttgcagaggaaactgagacttt 41
|||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 gctaagcacttacaactgtttgcagaggaaactgagacttt 41
>RF00839;mir-452;AANN01683404.1/5649-5565 9365:Erinaceus europaeus
(western European hedgehog)
Length = 85
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1 gctaagcagttacaactgtttgcagaggaaactgagact 39
|||| ||| ||||||||||||||||||||||||||||||
Sbjct: 1 gctaggcacttacaactgtttgcagaggaaactgagact 39
