miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32096_mmu-mir-465c-1:mirbase
Length = 81
Score = 101 bits (51), Expect = 7e-23
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggcgctgatctgatgaatnnnnnnnnnntgatcagggcct 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcct 60
Query: 61 ttctaagtagagtaaggctta 81
|||||||||||||||||||||
Sbjct: 61 ttctaagtagagtaaggctta 81
>32097_mmu-mir-465c-1:mirbase
Length = 81
Score = 101 bits (51), Expect = 7e-23
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggcgctgatctgatgaatnnnnnnnnnntgatcagggcct 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcct 60
Query: 61 ttctaagtagagtaaggctta 81
|||||||||||||||||||||
Sbjct: 61 ttctaagtagagtaaggctta 81
>32099_mmu-mir-465c-2:mirbase
Length = 81
Score = 101 bits (51), Expect = 7e-23
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggcgctgatctgatgaatnnnnnnnnnntgatcagggcct 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggcgctgatctgatgaataaaaaaaaaatgatcagggcct 60
Query: 61 ttctaagtagagtaaggctta 81
|||||||||||||||||||||
Sbjct: 61 ttctaagtagagtaaggctta 81
>32092_mmu-mir-465b-1:mirbase
Length = 79
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggcgctgatctgatgaatnnnnnnnnnntgatcagggcct 60
|||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggtgctgatctgatgaa--ataaaaaattgatcagggcct 58
Query: 61 ttctaagtagagtaaggctta 81
|||||||||||||||||||||
Sbjct: 59 ttctaagtagagtaaggctta 79
>32093_mmu-mir-465b-1:mirbase
Length = 79
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggcgctgatctgatgaatnnnnnnnnnntgatcagggcct 60
|||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggtgctgatctgatgaa--ataaaaaattgatcagggcct 58
Query: 61 ttctaagtagagtaaggctta 81
|||||||||||||||||||||
Sbjct: 59 ttctaagtagagtaaggctta 79
>32094_mmu-mir-465b-2:mirbase
Length = 79
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggcgctgatctgatgaatnnnnnnnnnntgatcagggcct 60
|||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggtgctgatctgatgaa--ataaaaaattgatcagggcct 58
Query: 61 ttctaagtagagtaaggctta 81
|||||||||||||||||||||
Sbjct: 59 ttctaagtagagtaaggctta 79
>32095_mmu-mir-465b-2:mirbase
Length = 79
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/81 (85%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 1 tgcaatgccctatttagaatggcgctgatctgatgaatnnnnnnnnnntgatcagggcct 60
|||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1 tgcaatgccctatttagaatggtgctgatctgatgaa--ataaaaaattgatcagggcct 58
Query: 61 ttctaagtagagtaaggctta 81
|||||||||||||||||||||
Sbjct: 59 ttctaagtagagtaaggctta 79
>32090_mmu-mir-465a:mirbase
Length = 74
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 49 tgatcagggcctttctaagtagagtaaggctta 81
|||||||||||||||||||||||||||||||||
Sbjct: 41 tgatcagggcctttctaagtagagtaaggctta 73
>32091_mmu-mir-465a:mirbase
Length = 74
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 49 tgatcagggcctttctaagtagagtaaggctta 81
|||||||||||||||||||||||||||||||||
Sbjct: 41 tgatcagggcctttctaagtagagtaaggctta 73
>32922_rno-mir-465:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 49 tgatcagggcctttctaagtagagtaaggctta 81
||||||| |||||||| ||||||||||||||||
Sbjct: 45 tgatcagtgcctttctgagtagagtaaggctta 77
>28137_mml-mir-890:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 cctttctaagtagagtaaggctta 81
||||||| ||||||||||||||||
Sbjct: 49 cctttctgagtagagtaaggctta 72
