miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32930_rno-mir-485:mirbase
Length = 79
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 63
Query: 61 cctctcttctagt 73
|||||||||||||
Sbjct: 64 cctctcttctagt 76
>27920_mml-mir-485:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>27921_mml-mir-485:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>28671_hsa-mir-485:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>28672_hsa-mir-485:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>31020_ppy-mir-485:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>31021_ppy-mir-485:mirbase
Length = 73
Score = 121 bits (61), Expect = 7e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>30388_ptr-mir-485:mirbase
Length = 72
Score = 119 bits (60), Expect = 3e-28
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 2 cttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctctc 61
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 1 cttggagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctctc 60
Query: 62 ctctcttctagt 73
||||||| ||||
Sbjct: 61 ctctcttttagt 72
>27188_eca-mir-485:mirbase
Length = 73
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>27189_eca-mir-485:mirbase
Length = 73
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>33390_bta-mir-485:mirbase
Length = 73
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 1 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 60
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 61 cctctcttttagt 73
>33850_oar-mir-485:mirbase
Length = 111
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 79 cctctcttttagt 91
>33851_oar-mir-485:mirbase
Length = 111
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 acttggagagaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctct 60
||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 19 acttgaagagaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctct 78
Query: 61 cctctcttctagt 73
|||||||| ||||
Sbjct: 79 cctctcttttagt 91
>26855_cfa-mir-485:mirbase
Length = 59
Score = 101 bits (51), Expect = 6e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 9 agaggctggccgtgatgaattcgattcatctaaacgagtcatacacggctctcctctct 67
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 1 agaggctggccgtgatgaattcgattcatcaaagcgagtcatacacggctctcctctct 59
