miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32933_rno-mir-489:mirbase
Length = 106
Score = 125 bits (63), Expect = 7e-30
Identities = 97/107 (90%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 1 actgctgcagtggcagcttggttgtcatatgtgtgatgacactttctaaagtcttccaga 60
|||||| ||||||||||||||||||| |||| |||||||||| |||| || |||||||
Sbjct: 1 actgctacagtggcagcttggttgtcgtatgcgtgatgacacgttctcgtgtattccaga 60
Query: 61 atgacaccacatatatggcagctaaactgttacatggaacaacaagt 107
|||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 atgacatcacatatatggcagctaaactgttaca-ggaacaacaagt 106
>27927_mml-mir-489:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 62 tgacaccacatatatggcagctaaactgttac 93
||||| |||||||| |||||||||||||||||
Sbjct: 53 tgacatcacatatacggcagctaaactgttac 84
>28678_hsa-mir-489:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 62 tgacaccacatatatggcagctaaactg 89
||||| |||||||| |||||||||||||
Sbjct: 53 tgacatcacatatacggcagctaaactg 80
>30393_ptr-mir-489:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 62 tgacaccacatatatggcagctaaactg 89
||||| |||||||| |||||||||||||
Sbjct: 53 tgacatcacatatacggcagctaaactg 80
>31026_ppy-mir-489:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 62 tgacaccacatatatggcagctaaactg 89
||||| |||||||| |||||||||||||
Sbjct: 53 tgacatcacatatacggcagctaaactg 80
