miRNEST 2.0, an integrative microRNA resource :: BLAST
>47523_ath-miRf10423-akr:pmrd
Length = 122
Score = 226 bits (114), Expect = 3e-60
Identities = 121/122 (99%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 9 tggtgtcggtcgacactatcaatgtgtgtcgagcgattttggagatcaatgtcgagcttg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtgtcggtcgacactatcaatgtgtgtcgagcgattttggagatcaatgtcgagcttg 60
Query: 69 ctcgattctgcttcgtcacagcctgatgtctcgtat-tatgcgatggtgtcgatcgacac 127
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 ctcgattctgcttcgtcacagcctgatgtctcgtatatatgcgatggtgtcgatcgacac 120
Query: 128 ca 129
||
Sbjct: 121 ca 122
>47593_ath-miRf10493-akr:pmrd
Length = 126
Score = 178 bits (90), Expect = 7e-46
Identities = 115/122 (94%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 7 ggtggtgtcggtcgacactatcaatgtgtgtcgagcgattttggagatcaatgtcgagct 66
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||
Sbjct: 1 ggtggtgtcggtcgacactatcaatgtgtgtcgagcgattctggagattaatgtccagcc 60
Query: 67 tgctcgattctgcttcgtcacagcctgatgtctcgtat-tatgcgatggtgtcgatcgac 125
|| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 tggtcgattctacttcgtcacagcctgatgtctcgtatatatgcgatggtgtcgatcgac 120
Query: 126 ac 127
||
Sbjct: 121 ac 122
>47934_ath-miRf10834-akr:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 109 cgatggtgtcgatcgacaccaag 131
|||||||||||||||||||||||
Sbjct: 66 cgatggtgtcgatcgacaccaag 88
>47147_ath-miRf10047-akr:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 108 gcgatggtgtcgatcgacacca 129
||||||||||||||||||||||
Sbjct: 91 gcgatggtgtcgatcgacacca 70
>48109_ath-miRf11009-akr:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 cacccaggtggtgtcggtcgacac 24
||||||| ||||||||||||||||
Sbjct: 84 cacccagttggtgtcggtcgacac 107
>48073_ath-miRf10973-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 109 cgatggtgtcgatcgacacc 128
||||||||||||||||||||
Sbjct: 52 cgatggtgtcgatcgacacc 71
>47554_ath-miRf10454-akr:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 109 cgatggtgtcgatcgacacc 128
||||||||||||||||||||
Sbjct: 47 cgatggtgtcgatcgacacc 28
>47364_ath-miRf10264-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 gatggtgtcgatcgacacca 129
||||||||||||||||||||
Sbjct: 79 gatggtgtcgatcgacacca 60
>47363_ath-miRf10263-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 gatggtgtcgatcgacacca 129
||||||||||||||||||||
Sbjct: 79 gatggtgtcgatcgacacca 60
>47224_ath-miRf10124-akr:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 109 cgatggtgtcgatcgacacc 128
||||||||||||||||||||
Sbjct: 66 cgatggtgtcgatcgacacc 85
>47088_ath-miR855:pmrd
Length = 272
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 112 tggtgtcgatcgacaccaag 131
||||||||||||||||||||
Sbjct: 100 tggtgtcgatcgacaccaag 81
