miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32938_rno-mir-496:mirbase
Length = 79
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 agtgttcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatgg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtgttcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatgg 60
Query: 61 ccaatctcctttcggcact 79
|||||||||||||||||||
Sbjct: 61 ccaatctcctttcggcact 79
>27936_mml-mir-496:mirbase
Length = 102
Score = 131 bits (66), Expect = 8e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 6 tcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaat 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaat 74
Query: 66 ctcctttcgg 75
||||||||||
Sbjct: 75 ctcctttcgg 84
>28687_hsa-mir-496:mirbase
Length = 102
Score = 131 bits (66), Expect = 8e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 6 tcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaat 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaat 74
Query: 66 ctcctttcgg 75
||||||||||
Sbjct: 75 ctcctttcgg 84
>30399_ptr-mir-496:mirbase
Length = 101
Score = 131 bits (66), Expect = 8e-32
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 6 tcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaat 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 tcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaat 73
Query: 66 ctcctttcgg 75
||||||||||
Sbjct: 74 ctcctttcgg 83
>27206_eca-mir-496:mirbase
Length = 103
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 6 tcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaat 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaat 75
Query: 66 ctcctttc 73
||||||||
Sbjct: 76 ctcctttc 83
>33401_bta-mir-496:mirbase
Length = 102
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 6 tcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaat 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaat 74
Query: 66 ctcctttc 73
||||||||
Sbjct: 75 ctcctttc 82
>33862_oar-mir-496:mirbase
Length = 119
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 6 tcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaat 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 tcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaat 93
Query: 66 ctcctttc 73
||||||||
Sbjct: 94 ctcctttc 101
>33863_oar-mir-496:mirbase
Length = 119
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 6 tcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaat 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 tcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaat 93
Query: 66 ctcctttc 73
||||||||
Sbjct: 94 ctcctttc 101
>31035_ppy-mir-496:mirbase
Length = 102
Score = 125 bits (63), Expect = 5e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 6 tcgaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaat 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcgaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaat 74
Query: 66 ctccttt 72
|||||||
Sbjct: 75 ctccttt 81
>26865_cfa-mir-496:mirbase
Length = 98
Score = 123 bits (62), Expect = 2e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 8 gaatggaggttgcccatggtgtgttcattttatttatgatgagtattacatggccaatct 67
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gaatggaggttgtccatggtgtgttcattttatttatgatgagtattacatggccaatct 72
Query: 68 cctttc 73
||||||
Sbjct: 73 cctttc 78
