miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00793;mir-497;ABRO01159172.1/3932-3821 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 112
Score = 159 bits (80), Expect = 7e-39
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 1 cctgcccccgccccagcagcacactgtggtttgtacggcactgtggccacgtccaaacca 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 cctgctcccgccccagcagcacactgtggtttgtacggcactgtggccacgtccaaacca 70
Query: 61 cactgtggtgttagagcgagggta 84
||||||||||||||||||||||||
Sbjct: 71 cactgtggtgttagagcgagggta 94
>RF00793;mir-497;ABRQ01154875.1/189-78 9813:Procavia capensis
(cape rock hyrax)
Length = 112
Score = 149 bits (75), Expect = 6e-36
Identities = 81/83 (97%)
Strand = Plus / Plus
Query: 1 cctgcccccgccccagcagcacactgtggtttgtacggcactgtggccacgtccaaacca 60
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 11 cctgctcccgccccagcagcacactgtggtttgtacggcattgtggccacgtccaaacca 70
Query: 61 cactgtggtgttagagcgagggt 83
|||||||||||||||||||||||
Sbjct: 71 cactgtggtgttagagcgagggt 93
>RF00793;mir-497;AAFR03049810.1/89806-89695 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 112
Score = 103 bits (52), Expect = 3e-22
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 1 cctgcccccgccccagcagcacactgtggtttgtacggcactgtggccacgtccaaacca 60
|||||| ||||||||||||||||||||||||||| | | | |||||| ||||||||||
Sbjct: 11 cctgcctccgccccagcagcacactgtggtttgttcagtgttatggccaagtccaaacca 70
Query: 61 cactgtggtgttagagcgagggta 84
||||||||||||||||||||||||
Sbjct: 71 cactgtggtgttagagcgagggta 94
