miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32943_rno-mir-503:mirbase
Length = 71
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tgccctagcagcgggaacagtactgcagtgagtgtttggtgccctggagtattgtttcca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgccctagcagcgggaacagtactgcagtgagtgtttggtgccctggagtattgtttccg 60
Query: 61 ctgcctgggta 71
|||||||||||
Sbjct: 61 ctgcctgggta 71
>31044_ppy-mir-503:mirbase
Length = 71
Score = 93.7 bits (47), Expect = 2e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 1 tgccctagcagcgggaacagtactgcagtgagtgtttggtgccctggagtattgtttcca 60
||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||
Sbjct: 1 tgccctagcagcgggaacagttctgcagtgagcgattggtgctctggagtattgtttccg 60
Query: 61 ctgcctgggta 71
||||| |||||
Sbjct: 61 ctgccagggta 71
>30407_ptr-mir-503:mirbase
Length = 70
Score = 83.8 bits (42), Expect = 1e-17
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 1 tgccctagcagcgggaacagtactgcagtgagtgtttggtgccctggagtattgtttcca 60
||||||||||||||||||||| |||||||||| | | ||||| ||||||||||||||||
Sbjct: 1 tgccctagcagcgggaacagttctgcagtgagcgatcggtgctctggagtattgtttccg 60
Query: 61 ctgcctgggt 70
||||| ||||
Sbjct: 61 ctgccagggt 70
>27945_mml-mir-503:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 9e-16
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 tgccctagcagcgggaacagtactgcagtgagtgtttggtgccctggagtattgtttcca 60
||||||||||||||||||||| |||||||||||| | || | ||||||||||||||||
Sbjct: 1 tgccctagcagcgggaacagttctgcagtgagtgatcagtactctggagtattgtttccg 60
Query: 61 ctgcctgggta 71
||||| |||||
Sbjct: 61 ctgccagggta 71
>28700_hsa-mir-503:mirbase
Length = 71
Score = 77.8 bits (39), Expect = 9e-16
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 tgccctagcagcgggaacagtactgcagtgagtgtttggtgccctggagtattgtttcca 60
||||||||||||||||||||| |||||||||| | | ||||| |||| |||||||||||
Sbjct: 1 tgccctagcagcgggaacagttctgcagtgagcgatcggtgctctggggtattgtttccg 60
Query: 61 ctgcctgggta 71
||||| |||||
Sbjct: 61 ctgccagggta 71
>27215_eca-mir-503:mirbase
Length = 71
Score = 71.9 bits (36), Expect = 6e-14
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1 tgccctagcagcgggaacagtactgcagtgagtgtttggtgccctggagtattgtt 56
|||||||||||||||||||||||||||||| | | | ||||| |||||||||||||
Sbjct: 1 tgccctagcagcgggaacagtactgcagtgggcgatcggtgctctggagtattgtt 56
>34115_ssc-mir-503:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tgccctagcagcgggaacagtactgcagtg 30
||||||||||||||||||||||||||||||
Sbjct: 17 tgccctagcagcgggaacagtactgcagtg 46
>26870_cfa-mir-503:mirbase
Length = 63
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tagcagcgggaacagtactgcagtg 30
|||||||||||||||||||||||||
Sbjct: 1 tagcagcgggaacagtactgcagtg 25
