miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00777;mir-541;AAHY01103470.1/40420-40331 10090:Mus musculus
          (house mouse)
          Length = 90

 Score =  178 bits (90), Expect = 8e-45
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gccaaaatcagagaagggattctgatgttggtcacactccaagagttttaaaatgagtgg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gccaaaatcagagaagggattctgatgttggtcacactccaagagttttaaaatgagtgg 60

                                        
Query: 61 cgaacacagaatccatactctgcttatggc 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 cgaacacagaatccatactctgcttatggc 90




>RF00777;mir-541;AANN01107744.1/773-685 9365:Erinaceus europaeus
          (western European hedgehog)
          Length = 89

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 65 cacagaatccatactctgcttatggc 90
          ||||||||||| ||||||||||||||
Sbjct: 64 cacagaatccagactctgcttatggc 89