miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32244_mmu-mir-669a-2:mirbase
Length = 97
Score = 107 bits (54), Expect = 1e-24
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcacacaca 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcacacaca 97
>32236_mmu-mir-669a-1:mirbase
Length = 97
Score = 103 bits (52), Expect = 2e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcacaca 95
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 ctatatttgaatatacataacatacacacacacgtataaacgcaagcacaca 93
>32237_mmu-mir-669a-1:mirbase
Length = 97
Score = 103 bits (52), Expect = 2e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcacaca 95
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 ctatatttgaatatacataacatacacacacacgtataaacgcaagcacaca 93
>32239_mmu-mir-669a-10:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32238_mmu-mir-669a-10:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32240_mmu-mir-669a-11:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32241_mmu-mir-669a-11:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32242_mmu-mir-669a-12:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32243_mmu-mir-669a-12:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32248_mmu-mir-669a-4:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32249_mmu-mir-669a-4:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32250_mmu-mir-669a-5:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32251_mmu-mir-669a-5:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32252_mmu-mir-669a-6:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32253_mmu-mir-669a-6:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32254_mmu-mir-669a-7:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32255_mmu-mir-669a-7:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32256_mmu-mir-669a-8:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32257_mmu-mir-669a-8:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32258_mmu-mir-669a-9:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32259_mmu-mir-669a-9:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 4e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 93
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ctatatttgaatatacataacatacacacacacgtataaacgcaagcaca 87
>32246_mmu-mir-669a-3:mirbase
Length = 109
Score = 95.6 bits (48), Expect = 6e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcacaca 95
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 50 ctatatttgaatatacataacatacacacacatgtataaacgcaagcacaca 101
>32247_mmu-mir-669a-3:mirbase
Length = 109
Score = 95.6 bits (48), Expect = 6e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacatacacacacacgtataaacgcaagcacaca 95
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 50 ctatatttgaatatacataacatacacacacatgtataaacgcaagcacaca 101
>32279_mmu-mir-669o:mirbase
Length = 96
Score = 93.7 bits (47), Expect = 2e-20
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 47 tatttgaatatacataacatacacacacacgtataaacgcaagcacacaca 97
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 45 tatttgaatatacataacatacacacacacgtataaacacaagcacacaca 95
>32280_mmu-mir-669o:mirbase
Length = 96
Score = 93.7 bits (47), Expect = 2e-20
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 47 tatttgaatatacataacatacacacacacgtataaacgcaagcacacaca 97
|||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 45 tatttgaatatacataacatacacacacacgtataaacacaagcacacaca 95
>32281_mmu-mir-669p-1:mirbase
Length = 87
Score = 79.8 bits (40), Expect = 3e-16
Identities = 49/51 (96%), Gaps = 2/51 (3%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacat--acacacacacgtataaacgcaagcac 92
||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 37 ctatatttgaatatacataacatacacacacacacgtataaacgcaagcac 87
>32282_mmu-mir-669p-2:mirbase
Length = 87
Score = 79.8 bits (40), Expect = 3e-16
Identities = 49/51 (96%), Gaps = 2/51 (3%)
Strand = Plus / Plus
Query: 44 ctatatttgaatatacataacat--acacacacacgtataaacgcaagcac 92
||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 37 ctatatttgaatatacataacatacacacacacacgtataaacgcaagcac 87
>32265_mmu-mir-669f:mirbase
Length = 121
Score = 71.9 bits (36), Expect = 8e-14
Identities = 43/44 (97%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 51 tgaatatacata-acatacacacacacgtataaacgcaagcaca 93
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 49 tgaatatacatatacatacacacacacgtataaacgcaagcaca 92
>32266_mmu-mir-669f:mirbase
Length = 121
Score = 71.9 bits (36), Expect = 8e-14
Identities = 43/44 (97%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 51 tgaatatacata-acatacacacacacgtataaacgcaagcaca 93
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 49 tgaatatacatatacatacacacacacgtataaacgcaagcaca 92
>32261_mmu-mir-669c:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 47 tatttgaatatacataacatacacacacac 76
|||||| ||||| |||||||||||||||||
Sbjct: 45 tatttgcatataaataacatacacacacac 74
>32123_mmu-mir-466d:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 51 tgaatatacata-acatacacacacacgtataaacgcaagcacacaca 97
|||||||||||| |||||||| ||||| || | ||||| |||||||||
Sbjct: 41 tgaatatacatatacatacacgcacacatagatacgcacgcacacaca 88
>32122_mmu-mir-466d:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 42/48 (87%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 51 tgaatatacata-acatacacacacacgtataaacgcaagcacacaca 97
|||||||||||| |||||||| ||||| || | ||||| |||||||||
Sbjct: 41 tgaatatacatatacatacacgcacacatagatacgcacgcacacaca 88
