miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32357_mmu-mir-770:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 gccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcc 60
Query: 61 tgacgtggagctggggccgcaggggtctgatggc 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacgtggagctggggccgcaggggtctgatggc 94
>32996_rno-mir-770:mirbase
Length = 76
Score = 151 bits (76), Expect = 1e-37
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 9 ctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcctgacgtgg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcctgacgtgg 60
Query: 69 agctggggccgcaggg 84
||||||||||||||||
Sbjct: 61 agctggggccgcaggg 76
>28124_mml-mir-770:mirbase
Length = 98
Score = 73.8 bits (37), Expect = 2e-14
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1 gccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcc 60
||||||||| | ||| |||| |||||||||| ||||||| ||||| ||| ||||||||
Sbjct: 5 gccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggcc 64
Query: 61 tgacgtggagctggggccgcaggggtctg 89
||| |||| ||||||||| ||||||||||
Sbjct: 65 tgatgtggtgctggggcctcaggggtctg 93
>29009_hsa-mir-770:mirbase
Length = 98
Score = 73.8 bits (37), Expect = 2e-14
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1 gccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcc 60
||||||||| | ||| |||| |||||||||| ||||||| ||||| ||| ||||||||
Sbjct: 5 gccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggcc 64
Query: 61 tgacgtggagctggggccgcaggggtctg 89
||| |||| ||||||||| ||||||||||
Sbjct: 65 tgatgtggtgctggggcctcaggggtctg 93
>30602_ptr-mir-770:mirbase
Length = 97
Score = 73.8 bits (37), Expect = 2e-14
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1 gccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcc 60
||||||||| | ||| |||| |||||||||| ||||||| ||||| ||| ||||||||
Sbjct: 4 gccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggcc 63
Query: 61 tgacgtggagctggggccgcaggggtctg 89
||| |||| ||||||||| ||||||||||
Sbjct: 64 tgatgtggtgctggggcctcaggggtctg 92
>31246_ppy-mir-770:mirbase
Length = 98
Score = 73.8 bits (37), Expect = 2e-14
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1 gccaccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcc 60
||||||||| | ||| |||| |||||||||| ||||||| ||||| ||| ||||||||
Sbjct: 5 gccaccttccgagcctccagtaccacgtgtcagggccacatgagctgggcctcgtgggcc 64
Query: 61 tgacgtggagctggggccgcaggggtctg 89
||| |||| ||||||||| ||||||||||
Sbjct: 65 tgatgtggtgctggggcctcaggggtctg 93
>27271_eca-mir-770:mirbase
Length = 95
Score = 71.9 bits (36), Expect = 8e-14
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 5 ccttctgtgcccccagcaccacgtgtctgggccacgtgagcaacgccacgtgggcctgac 64
||||| ||||| |||||||||||||||||||||| |||||||| | ||| |||||| ||
Sbjct: 6 ccttccgtgcctccagcaccacgtgtctgggccatgtgagcaaggtcacatgggcccgat 65
Query: 65 gtggagctgggg 76
|||| |||||||
Sbjct: 66 gtggtgctgggg 77
