miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32368_mmu-mir-876:mirbase
Length = 81
Score = 161 bits (81), Expect = 9e-41
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 tcacgtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcacgtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttac 60
Query: 61 aaagtaattcatagtgcttca 81
|||||||||||||||||||||
Sbjct: 61 aaagtaattcatagtgcttca 81
>33003_rno-mir-876:mirbase
Length = 79
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| |||||||||||||||||||| |||||||||||| |||||| ||||||| |||||
Sbjct: 3 gtgctgtggatttctctgtgaatcaccatatcaaatctaatgtggtggtggtttgcaaag 62
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 63 taattcatagtgcttca 79
>26911_cfa-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>28130_mml-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>28129_mml-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>29015_hsa-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>29016_hsa-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>31252_ppy-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>31253_ppy-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>33462_bta-mir-876:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>30607_ptr-mir-876:mirbase
Length = 80
Score = 95.6 bits (48), Expect = 4e-21
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| || ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctaagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttc 80
||||||||||||||||
Sbjct: 65 taattcatagtgcttc 80
>27277_eca-mir-876:mirbase
Length = 81
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| | ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctgagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
>27276_eca-mir-876:mirbase
Length = 81
Score = 89.7 bits (45), Expect = 3e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 5 gtgctatggatttctctgtgaatcactatatcaaatctagtgtggtagtggtttacaaag 64
||||| ||||||||| |||||||||| ||||| | ||| |||||| |||||||||||||
Sbjct: 5 gtgctgtggatttctttgtgaatcaccatatctgagctaatgtggtggtggtttacaaag 64
Query: 65 taattcatagtgcttca 81
|||||||||||||||||
Sbjct: 65 taattcatagtgcttca 81
