miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32377_mmu-mir-883a:mirbase
Length = 76
Score = 151 bits (76), Expect = 8e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 gcactataatgctgagagaagtagcagttactttattctataagtaactgcaacagctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcactataatgctgagagaagtagcagttactttattctataagtaactgcaacagctct 60
Query: 61 cagtattgtaaggctc 76
||||||||||||||||
Sbjct: 61 cagtattgtaaggctc 76
>33009_rno-mir-883:mirbase
Length = 77
Score = 91.7 bits (46), Expect = 6e-20
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 8 aatgctgagagaagtagcagttactttattctat-aagtaactgcaacagctctcagtat 66
||||||||||||||||||||||||||| | || | |||||||||||||| ||||||||||
Sbjct: 8 aatgctgagagaagtagcagttactttttactcttaagtaactgcaacatctctcagtat 67
Query: 67 tgtaaggctc 76
||||||||||
Sbjct: 68 tgtaaggctc 77
>32378_mmu-mir-883b:mirbase
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 21 gtagcagttactttattctataagtaactgcaacagctctcagtattgtaagg 73
|||||||| ||||| | |||| ||||||||||||| |||||||||||||||||
Sbjct: 23 gtagcagtcactttgtactatgagtaactgcaacatctctcagtattgtaagg 75
>32379_mmu-mir-883b:mirbase
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 21 gtagcagttactttattctataagtaactgcaacagctctcagtattgtaagg 73
|||||||| ||||| | |||| ||||||||||||| |||||||||||||||||
Sbjct: 23 gtagcagtcactttgtactatgagtaactgcaacatctctcagtattgtaagg 75
