miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00909;mir-883;AAHY01211887.1/3534-3610 10090:Mus musculus
          (house mouse)
          Length = 77

 Score =  151 bits (76), Expect = 1e-36
 Identities = 76/76 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gcactataatgctgagagaagtagcagttactttattctataagtaactgcaacagctct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  gcactataatgctgagagaagtagcagttactttattctataagtaactgcaacagctct 61

                          
Query: 61 cagtattgtaaggctc 76
          ||||||||||||||||
Sbjct: 62 cagtattgtaaggctc 77




>RF00909;mir-883;CAAA01041975.1/17252-17329 10090:Mus musculus
          (house mouse)
          Length = 78

 Score = 65.9 bits (33), Expect = 7e-11
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                               
Query: 21 gtagcagttactttattctataagtaactgcaacagctctcagtattgtaagg 73
          |||||||| ||||| | |||| ||||||||||||| |||||||||||||||||
Sbjct: 23 gtagcagtcactttgtactatgagtaactgcaacatctctcagtattgtaagg 75