miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00909;mir-883;CAAA01041975.1/17252-17329 10090:Mus musculus
(house mouse)
Length = 78
Score = 155 bits (78), Expect = 1e-37
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 1 tgcaatgcattactgagaatgggtagcagtcactttgtactatgagtaactgcaacatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcaatgcattactgagaatgggtagcagtcactttgtactatgagtaactgcaacatct 60
Query: 61 ctcagtattgtaaggttc 78
||||||||||||||||||
Sbjct: 61 ctcagtattgtaaggttc 78
>RF00909;mir-883;AABR04058752.1/1716-1639 10116:Rattus norvegicus
(Norway rat)
Length = 78
Score = 67.9 bits (34), Expect = 2e-11
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 1 tgcaatgcattactgagaatgggtagcagtcactttgtactatgagtaactgcaacatct 60
|||||| |||||||||| | | ||| |||| | |||||||||||||||||| || ||||
Sbjct: 1 tgcaatacattactgaggaggtgtaacagttatattgtactatgagtaactgaaatatct 60
Query: 61 ctcagtattgtaaggttc 78
||||||||| ||||||||
Sbjct: 61 ctcagtattataaggttc 78
>RF00909;mir-883;AAHY01211887.1/3534-3610 10090:Mus musculus
(house mouse)
Length = 77
Score = 65.9 bits (33), Expect = 7e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 23 gtagcagtcactttgtactatgagtaactgcaacatctctcagtattgtaagg 75
|||||||| ||||| | |||| ||||||||||||| |||||||||||||||||
Sbjct: 22 gtagcagttactttattctataagtaactgcaacagctctcagtattgtaagg 74
