miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32400_mmu-mir-1264:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 cctggcatatagcaggtcctcaataagtatttgttgaaaaaataaatgaagcaacaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctggcatatagcaggtcctcaataagtatttgttgaaaaaataaatgaagcaacaaatc 60
Query: 61 ttatttgagcacctgttatgtggagg 86
||||||||||||||||||||||||||
Sbjct: 61 ttatttgagcacctgttatgtggagg 86
>27291_eca-mir-1264:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 14 aggtcctcaataagtatttgttgaaaaaataaatgaagcaacaaatcttatttgagcacc 73
|||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||
Sbjct: 1 aggtcctcaataagtatttgttgaaagaataaatgaaccaacaagtcttatttgagcacc 60
Query: 74 tgttatgtg 82
|||||||||
Sbjct: 61 tgttatgtg 69
>29112_hsa-mir-1264:mirbase
Length = 69
Score = 105 bits (53), Expect = 5e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 14 aggtcctcaataagtatttgttgaaaaaataaatgaagcaacaaatcttatttgagcacc 73
|||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||
Sbjct: 1 aggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacc 60
Query: 74 tgttatgtg 82
|||||||||
Sbjct: 61 tgttatgtg 69
>31324_ppy-mir-1264:mirbase
Length = 69
Score = 105 bits (53), Expect = 5e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 14 aggtcctcaataagtatttgttgaaaaaataaatgaagcaacaaatcttatttgagcacc 73
|||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||
Sbjct: 1 aggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacc 60
Query: 74 tgttatgtg 82
|||||||||
Sbjct: 61 tgttatgtg 69
>30682_ptr-mir-1264:mirbase
Length = 68
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 15 ggtcctcaataagtatttgttgaaaaaataaatgaagcaacaaatcttatttgagcacct 74
||||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||
Sbjct: 1 ggtcctcaataagtatttgttgaaagaataaataaaccaacaagtcttatttgagcacct 60
Query: 75 gttatgtg 82
||||||||
Sbjct: 61 gttatgtg 68
