miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9EQM6|DGCR8_MOUSE Microprocessor complex subunit DGCR8 OS=Mus
           musculus GN=Dgcr8 PE=2 SV=2
          Length = 773

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   QSPPPPLQTSSDAEVMDVGSGGDGQS 78
           QSPPPPLQTSSDAEVMDVGSGGDGQS
Sbjct: 34  QSPPPPLQTSSDAEVMDVGSGGDGQS 59




>sp|A6QR44|DGCR8_BOVIN Microprocessor complex subunit DGCR8 OS=Bos
           taurus GN=DGCR8 PE=2 SV=1
          Length = 760

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +1

Query: 1   QSPPPPLQTSSDAEVMDVGSGGDGQS 78
           QSPPPPLQTSSDAEVMDVGSGGDGQ+
Sbjct: 34  QSPPPPLQTSSDAEVMDVGSGGDGQA 59




>sp|Q8WYQ5|DGCR8_HUMAN Microprocessor complex subunit DGCR8 OS=Homo
           sapiens GN=DGCR8 PE=1 SV=1
          Length = 773

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +1

Query: 1   QSPPPPLQTSSDAEVMDVGSGGDGQS 78
           QSPPPPLQTSS AEVMDVGSGGDGQS
Sbjct: 34  QSPPPPLQTSSGAEVMDVGSGGDGQS 59