miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32407_mmu-mir-1843:mirbase
Length = 65
Score = 129 bits (65), Expect = 2e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 gaatatggaggtctctgtctgacttagaatagctggctgagtctgatcgttcacctccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatatggaggtctctgtctgacttagaatagctggctgagtctgatcgttcacctccat 60
Query: 61 acaac 65
|||||
Sbjct: 61 acaac 65
>32409_mmu-mir-1843b:mirbase
Length = 66
Score = 89.7 bits (45), Expect = 2e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 5 atggaggtctctgtctgacttagaatagctggctgagtctgatcgttcacctccatacaa 64
||||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||||
Sbjct: 5 atggaggtctctgtctgacttaggatagctggctaagtccgatcgttcccctccatacaa 64
Query: 65 c 65
|
Sbjct: 65 c 65
>32410_mmu-mir-1843b:mirbase
Length = 66
Score = 89.7 bits (45), Expect = 2e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 5 atggaggtctctgtctgacttagaatagctggctgagtctgatcgttcacctccatacaa 64
||||||||||||||||||||||| |||||||||| |||| |||||||| |||||||||||
Sbjct: 5 atggaggtctctgtctgacttaggatagctggctaagtccgatcgttcccctccatacaa 64
Query: 65 c 65
|
Sbjct: 65 c 65
>26927_cfa-mir-1843:mirbase
Length = 60
Score = 75.8 bits (38), Expect = 3e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 6 tggaggtctctgtctgacttagaatagctggctgagtctgatcgttcacctccataca 63
|||||||||||||||| ||||| | |||||||| ||||||||||||| ||||||||||
Sbjct: 3 tggaggtctctgtctggcttaggacagctggctaagtctgatcgttcccctccataca 60
