miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5RJ54|ZN187_MOUSE Zinc finger protein 187 OS=Mus musculus
           GN=Znf187 PE=2 SV=1
          Length = 466

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -2

Query: 80  RALLLTHHQRVHGRSKRHHCNECGKA 3
           RALLLTHHQRVHGRSKRHHCNECGKA
Sbjct: 365 RALLLTHHQRVHGRSKRHHCNECGKA 390




>sp|Q16670|ZN187_HUMAN Zinc finger protein 187 OS=Homo sapiens
           GN=ZNF187 PE=2 SV=2
          Length = 478

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = -2

Query: 80  RALLLTHHQRVHGRSKRHHCNECGKA 3
           +ALLLTHHQR+H  SK H CNECGKA
Sbjct: 377 QALLLTHHQRIHSHSKSHQCNECGKA 402




>sp|A6QNZ0|ZN187_BOVIN Zinc finger protein 187 OS=Bos taurus
           GN=ZNF187 PE=2 SV=1
          Length = 479

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = -2

Query: 80  RALLLTHHQRVHGRSKRHHCNECGK 6
           +ALLLTHHQR+H  S+ H CNECGK
Sbjct: 378 QALLLTHHQRIHSHSRSHQCNECGK 402