miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>48097_ath-miRf10997-akr:pmrd
          Length = 104

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tttctccgacctcctccgagaaacccatctctcctcctccatttttgcccttggagtttc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6  tttctccgacctcctccgagaaacccatctctcctcctccatttttgcccttggagtttc 65

                                          
Query: 61 atcagcaagtttctcggagtctcgtcggagag 92
          ||||||||||||||||||||||||||||||||
Sbjct: 66 atcagcaagtttctcggagtctcgtcggagag 97




>47817_ath-miRf10717-akr:pmrd
          Length = 106

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1  tttctccgacctcctccgagaaacccatctctcctcctccatttttgcccttggagtttc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 tttctccgacctcctccgagaaacccatctctcctcctccatttttgcccttggagtttc 40

                                          
Query: 61 atcagcaagtttctcggagtctcgtcggagag 92
          ||||||||||||||||||||||||||||||||
Sbjct: 39 atcagcaagtttctcggagtctcgtcggagag 8




>47487_ath-miRf10387-akr:pmrd
          Length = 104

 Score =  182 bits (92), Expect = 3e-47
 Identities = 92/92 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tttctccgacctcctccgagaaacccatctctcctcctccatttttgcccttggagtttc 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6  tttctccgacctcctccgagaaacccatctctcctcctccatttttgcccttggagtttc 65

                                          
Query: 61 atcagcaagtttctcggagtctcgtcggagag 92
          ||||||||||||||||||||||||||||||||
Sbjct: 66 atcagcaagtttctcggagtctcgtcggagag 97