miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01942;mir-1937;AAHX01053497.1/2833-2704 10116:Rattus norvegicus
(Norway rat)
Length = 130
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggatc 62
|||||||||||||||||||||||
Sbjct: 50 catttgggggctcatccgggatc 28
>RF01942;mir-1937;AAHX01047643.1/47425-47527 10116:Rattus
norvegicus (Norway rat)
Length = 103
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggatc 62
|||||||||||||||||||||||
Sbjct: 50 catttgggggctcatccgggatc 28
>RF01942;mir-1937;AAHX01073317.1/46828-46707 10116:Rattus
norvegicus (Norway rat)
Length = 122
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggatc 62
|||||||||||||||||||||||
Sbjct: 47 catttgggggctcatccgggatc 25
>RF01942;mir-1937;AAHX01009221.1/53470-53369 10116:Rattus
norvegicus (Norway rat)
Length = 102
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggatc 62
|||||||||||||||||||||||
Sbjct: 49 catttgggggctcatccgggatc 27
>RF01942;mir-1937;AABR04006542.1/34749-34880 10116:Rattus
norvegicus (Norway rat)
Length = 132
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggatc 62
|||||||||||||||||||||||
Sbjct: 50 catttgggggctcatccgggatc 28
>RF01942;mir-1937;AAHX01012094.1/89116-89001 10116:Rattus
norvegicus (Norway rat)
Length = 116
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggatc 62
|||||||||||||||||||||||
Sbjct: 45 catttgggggctcatccgggatc 23
>RF01942;mir-1937;AABR04092364.1/4211-4333 10116:Rattus norvegicus
(Norway rat)
Length = 123
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggatc 62
|||||||||||||||||||||||
Sbjct: 48 catttgggggctcatccgggatc 26
>RF01942;mir-1937;AABR04001902.1/46010-45889 10116:Rattus
norvegicus (Norway rat)
Length = 122
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 41 atttgggggctcatccgggatc 62
||||||||||||||||||||||
Sbjct: 47 atttgggggctcatccgggatc 26
>RF01942;mir-1937;AABR04000029.1/112487-112603 10116:Rattus
norvegicus (Norway rat)
Length = 117
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 41 atttgggggctcatccgggatc 62
||||||||||||||||||||||
Sbjct: 48 atttgggggctcatccgggatc 27
>RF01942;mir-1937;AAHX01070168.1/44419-44318 10116:Rattus
norvegicus (Norway rat)
Length = 102
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggat 61
||||||||||||||||||||||
Sbjct: 49 catttgggggctcatccgggat 28
>RF01942;mir-1937;AABR04027080.1/10888-11008 10116:Rattus
norvegicus (Norway rat)
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggat 61
||||||||||||||||||||||
Sbjct: 47 catttgggggctcatccgggat 26
>RF01942;mir-1937;AABR04089160.1/6406-6526 10116:Rattus norvegicus
(Norway rat)
Length = 121
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggat 61
||||||||||||||||||||||
Sbjct: 47 catttgggggctcatccgggat 26
>RF01942;mir-1937;ABRQ01556451.1/794-671 9813:Procavia capensis
(cape rock hyrax)
Length = 124
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggat 61
||||||||||||||||||||||
Sbjct: 50 catttgggggctcatccgggat 29
>RF01942;mir-1937;ABRQ01103710.1/8562-8680 9813:Procavia capensis
(cape rock hyrax)
Length = 119
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 catttgggggctcatccgggat 61
||||||||||||||||||||||
Sbjct: 47 catttgggggctcatccgggat 26
