miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00455;mir-15;AAYZ01325292.1/263-348 9978:Ochotona princeps
(American pika)
Length = 86
Score = 137 bits (69), Expect = 3e-32
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||
Sbjct: 2 ccttaaagtactgtagcagcacatcatggtttacataatatagtcaatatgcgaatcata 61
Query: 67 atttgctgctctagaaatttaagga 91
|||||||||||||||||||||||||
Sbjct: 62 atttgctgctctagaaatttaagga 86
>RF00455;mir-15;AADN02021066.1/63906-63821 9031:Gallus gallus
(chicken)
Length = 86
Score = 113 bits (57), Expect = 4e-25
Identities = 78/85 (91%)
Strand = Plus / Plus
Query: 7 ccttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcatt 66
|||||||||||| ||||||||||||||||||| ||| || ||| |||||||||||||||
Sbjct: 2 ccttaaagtactctagcagcacatcatggtttgcatgctgtagtgaagatgcgaatcatt 61
Query: 67 atttgctgctctagaaatttaagga 91
|||||||||| ||||||||||||||
Sbjct: 62 atttgctgctttagaaatttaagga 86
>RF00455;mir-15;AAPN01094471.1/3183-3268 9258:Ornithorhynchus
anatinus (platypus)
Length = 86
Score = 95.6 bits (48), Expect = 1e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 20 tagcagcacatcatggtttacatactacagtcaagatgcgaatcattatttgctgctcta 79
||||||||||||||||||| ||| || || |||||||||||||||||||||||||| ||
Sbjct: 15 tagcagcacatcatggtttgcatggtatagccaagatgcgaatcattatttgctgcttta 74
Query: 80 gaaatttaagga 91
||||||||||||
Sbjct: 75 gaaatttaagga 86
>RF00455;mir-15;AAFR03046999.1/49599-49513 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 87
Score = 61.9 bits (31), Expect = 1e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 56 tgcgaatcattatttgctgctctagaaatttaagg 90
||||||||||||||||||||| |||||||||||||
Sbjct: 52 tgcgaatcattatttgctgctttagaaatttaagg 86
>RF00455;mir-15;AAWZ01001750.1/5603-5688 28377:Anolis carolinensis
(green anole)
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 9 ttaaagtactgtagcagcacatcatggtttacatactacagtcaagatgcgaatcattat 68
|||||||||| ||||||||||||||| ||| || | ||| || |||| | |||||||
Sbjct: 4 ttaaagtactctagcagcacatcatgatttgtatgtcatagtaaatatgcaagtcattat 63
Query: 69 ttgctgctctagaaatttaa 88
|||||||| ||||| |||||
Sbjct: 64 ttgctgctttagaattttaa 83
>RF00455;mir-15;AANH01002998.1/16865-16950 69293:Gasterosteus
aculeatus (three-spined stickleback)
Length = 86
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 56 tgcgaatcattatttgctgctctagaaatttaagga 91
|||||| |||||||||||||| ||||| ||||||||
Sbjct: 51 tgcgaaccattatttgctgctttagaattttaagga 86
>RF00455;mir-15;BAAF04019869.1/1029-1115 8090:Oryzias latipes
(Japanese medaka)
Length = 87
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 56 tgcgaatcattatttgctgctctagaaatttaagga 91
|||||| |||||||||||||| ||||| ||||||||
Sbjct: 52 tgcgaaccattatttgctgctttagaattttaagga 87
>RF00455;mir-15;ABQF01022934.1/39859-39944 59729:Taeniopygia
guttata
Length = 86
Score = 46.1 bits (23), Expect = 8e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 12 aagtactgtagcagcacatcatggttt 38
|||| ||||||||||||||||||||||
Sbjct: 7 aagtgctgtagcagcacatcatggttt 33
>RF00455;mir-15;CT027989.8/7473-7560 7955:Danio rerio (zebrafish)
Length = 88
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 ctgtagcagcacatcatggttt 38
||||||||||||||||||||||
Sbjct: 12 ctgtagcagcacatcatggttt 33
>RF00455;mir-15;AAVX01576111.1/286-371 7868:Callorhinchus milii
(ghost shark)
Length = 86
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 ctgtagcagcacatcatggttt 38
||||||||||||||||||||||
Sbjct: 12 ctgtagcagcacatcatggttt 33
