miRNEST 2.0, an integrative microRNA resource :: BLAST
>27783_mml-mir-192:mirbase
Length = 110
Score = 161 bits (81), Expect = 1e-40
Identities = 96/101 (95%)
Strand = Plus / Plus
Query: 10 gagtgcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctg 69
|||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 10 gagtgcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctg 69
Query: 70 ccagttccataggtcacaggtatgttcgcctcaatgccagc 110
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 70 ccaattccataggtcacaggtatgttcgcctcaatgccagc 110
>28500_hsa-mir-192:mirbase
Length = 110
Score = 161 bits (81), Expect = 1e-40
Identities = 96/101 (95%)
Strand = Plus / Plus
Query: 10 gagtgcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctg 69
|||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 10 gagtgcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctg 69
Query: 70 ccagttccataggtcacaggtatgttcgcctcaatgccagc 110
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 70 ccaattccataggtcacaggtatgttcgcctcaatgccagc 110
>30881_ppy-mir-192:mirbase
Length = 110
Score = 161 bits (81), Expect = 1e-40
Identities = 96/101 (95%)
Strand = Plus / Plus
Query: 10 gagtgcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctg 69
|||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 10 gagtgcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctg 69
Query: 70 ccagttccataggtcacaggtatgttcgcctcaatgccagc 110
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 70 ccaattccataggtcacaggtatgttcgcctcaatgccagc 110
>30266_ptr-mir-192:mirbase
Length = 109
Score = 159 bits (80), Expect = 5e-40
Identities = 95/100 (95%)
Strand = Plus / Plus
Query: 10 gagtgcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctg 69
|||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||
Sbjct: 10 gagtgcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctg 69
Query: 70 ccagttccataggtcacaggtatgttcgcctcaatgccag 109
||| ||||||||||||||||||||||||||||||||||||
Sbjct: 70 ccaattccataggtcacaggtatgttcgcctcaatgccag 109
>33260_bta-mir-192:mirbase
Length = 106
Score = 153 bits (77), Expect = 3e-38
Identities = 95/101 (94%)
Strand = Plus / Plus
Query: 10 gagtgcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctg 69
|||||||||||||||||||||||||||||||||||||| |||| | || ||||||||||
Sbjct: 6 gagtgcacagggctctgacctatgaattgacagccagtgctcttgtgtcccctctggctg 65
Query: 70 ccagttccataggtcacaggtatgttcgcctcaatgccagc 110
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 66 ccaattccataggtcacaggtatgttcgcctcaatgccagc 106
>31909_mmu-mir-192:mirbase
Length = 89
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 12 gtgcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctgcc 71
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 2 gtgcacagggctctgacctatgaattgacagccagtactcttttctctcctctggctgcc 61
Query: 72 agttccataggtcacaggtatgttc 96
| |||||||||||||||||||||||
Sbjct: 62 aattccataggtcacaggtatgttc 86
>34020_ssc-mir-192:mirbase
Length = 80
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 14 gcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctgccag 73
|||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
Query: 74 ttccataggtcacaggtatg 93
||||||||||||||||||||
Sbjct: 61 ttccataggtcacaggtatg 80
>31521_oan-mir-192:mirbase
Length = 91
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 14 gcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctgccag 73
|||||||||||||||||||||||||||||||||| |||| | | |||||||||||||
Sbjct: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
Query: 74 ttccataggtcacaggtatgttcgcct 100
|||||||||||||||||||||||||||
Sbjct: 65 ttccataggtcacaggtatgttcgcct 91
>26747_cfa-mir-192:mirbase
Length = 65
Score = 97.6 bits (49), Expect = 2e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 24 ctgacctatgaattgacagccagtactctgatctcgcctctggctgccagttccataggt 83
|||||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||
Sbjct: 1 ctgacctatgaattgacagccagtgctctcatctctcctctggctgccaattccataggt 60
Query: 84 cacag 88
|||||
Sbjct: 61 cacag 65
>27073_eca-mir-192:mirbase
Length = 61
Score = 75.8 bits (38), Expect = 6e-15
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 24 ctgacctatgaattgacagccagtactctgatctcgcctctggctgccagttccataggt 83
|||||||||||||||||||||||| |||| |||| ||||||||||||| ||||||||||
Sbjct: 1 ctgacctatgaattgacagccagtgctcttgtctc-cctctggctgccaattccataggt 59
Query: 84 ca 85
||
Sbjct: 60 ca 61
>34619_fru-mir-192:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 tgacctatgaattgacagccagta 48
||||||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagccagta 39
>34766_tni-mir-192:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 25 tgacctatgaattgacagccagta 48
||||||||||||||||||||||||
Sbjct: 11 tgacctatgaattgacagccagta 34
>25812_xtr-mir-192:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 tgacctatgaattgacagccagt 47
|||||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagccagt 38
>34340_dre-mir-192:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 25 tgacctatgaattgacagccagt 47
|||||||||||||||||||||||
Sbjct: 17 tgacctatgaattgacagccagt 39
>25512_pma-mir-192:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 25 tgacctatgaattgacagcc 44
||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagcc 35
>31535_oan-mir-215:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 25 tgacctatgaattgacagccagta 48
|||||||||||||||||| |||||
Sbjct: 31 tgacctatgaattgacagacagta 54
