miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48344_bna-miR166c:pmrd
Length = 128
Score = 111 bits (56), Expect = 1e-25
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 6 gagccaaaagttcaggtggatgatgcttggctcgagaccattaaatatgatcattg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagccaaaagttcaggtggatgatgcttggctcgagaccattaaatatgatcattg 56
Score = 75.8 bits (38), Expect = 7e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 96 agtcggaccaggcttcattcccctcaacttacacgttt 133
||||||||||||||||||||||||||||||||||||||
Sbjct: 91 agtcggaccaggcttcattcccctcaacttacacgttt 128
>48343_bna-miR166b:pmrd
Length = 118
Score = 89.7 bits (45), Expect = 5e-19
Identities = 48/49 (97%)
Strand = Plus / Plus
Query: 13 aagttcaggtggatgatgcttggctcgagaccattaaatatgatcattg 61
||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 aagttcaggtggatgatgcttggctcgagaccattcaatatgatcattg 49
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccctcaactt 125
|||||||||||||||||||||||||||||
Sbjct: 90 gtcggaccaggcttcattcccctcaactt 118
>46950_ath-miR166f:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccctcaactt 125
|||||||||||||||||||||||||||||
Sbjct: 77 gtcggaccaggcttcattcccctcaactt 105
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 13 aagttcaggtggatgatgcttggctcgagaccatt 47
||||||||||| ||||||| |||||||||||||||
Sbjct: 1 aagttcaggtgaatgatgcctggctcgagaccatt 35
>54795_vvi-miR166g:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctcaac 94
>54794_vvi-miR166f:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctcaac 94
>54543_sly-miR166a:pmrd
Length = 111
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattcccctcaac 111
>51628_ptc-miR166d:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctcaac 101
>48849_osa-miR166f:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattcccctcaac 97
>46951_ath-miR166g:pmrd
Length = 122
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||||||||
Sbjct: 85 tcggaccaggcttcattcccctcaac 110
>46949_ath-miR166e:pmrd
Length = 143
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccctcaa 122
||||||||||||||||||||||||||
Sbjct: 118 gtcggaccaggcttcattcccctcaa 143
>46870_aqc-miR166e:pmrd
Length = 147
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccctcaa 122
||||||||||||||||||||||||||
Sbjct: 120 gtcggaccaggcttcattcccctcaa 145
>54972_zma-miR166p:pmrd
Length = 95
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaa 122
|||||||||||||||||||||||||
Sbjct: 71 tcggaccaggcttcattcccctcaa 95
>54792_vvi-miR166d:pmrd
Length = 160
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaa 122
|||||||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcattcccctcaa 153
>54578_smo-miR166c:pmrd
Length = 138
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccctca 121
|||||||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcccctca 130
>51636_ptc-miR166l:pmrd
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaa 122
|||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcccctcaa 92
>51633_ptc-miR166i:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaa 122
|||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctcaa 98
>51630_ptc-miR166f:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaa 122
|||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctcaa 100
>51559_pta-miR166b:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccctca 121
|||||||||||||||||||||||||
Sbjct: 89 gtcggaccaggcttcattcccctca 113
>48847_osa-miR166d:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaa 122
|||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccctcaa 115
>54577_smo-miR166b:pmrd
Length = 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 99 tcggaccaggcttcattcccctca 122
>54576_smo-miR166a:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 108 tcggaccaggcttcattcccctca 131
>54425_sbi-miR166j:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 85 tcggaccaggcttcattcccctca 108
>51637_ptc-miR166m:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>51374_ppt-miR166g:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>51373_ppt-miR166f:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>51372_ppt-miR166e:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>51369_ppt-miR166b:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>51368_ppt-miR166a:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>48844_osa-miR166a:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 110 tcggaccaggcttcattcccctca 133
>48550_gma-miR166n:pmrd
Length = 409
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctca 121
||||||||||||||||||||||||
Sbjct: 1 tcggaccaggcttcattcccctca 24
>54973_zma-miR166q:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctc 120
|||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctc 91
>54970_zma-miR166n:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctc 120
|||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctc 96
>54796_vvi-miR166h:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaact 124
||||||||||||||||||||| |||||
Sbjct: 69 tcggaccaggcttcattccccccaact 95
>51632_ptc-miR166h:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaact 124
||||||||||||||||||||| |||||
Sbjct: 72 tcggaccaggcttcattccccccaact 98
>51631_ptc-miR166g:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaact 124
||||||||||||||||||||| |||||
Sbjct: 74 tcggaccaggcttcattccccccaact 100
>51626_ptc-miR166b:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaact 124
||||||||||||||||||||| |||||
Sbjct: 77 tcggaccaggcttcattccccccaact 103
>51371_ppt-miR166d:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctc 120
|||||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattcccctc 104
>51370_ppt-miR166c:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctc 120
|||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccctc 99
>48846_osa-miR166c:pmrd
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaact 124
||||||||||||||||||||| |||||
Sbjct: 91 tcggaccaggcttcattccccccaact 117
>46944_ath-miR165b:pmrd
Length = 182
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccctcaac 123
||||||||||||||||| |||||||||
Sbjct: 136 gtcggaccaggcttcatccccctcaac 162
>54971_zma-miR166o:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||| ||||
Sbjct: 69 tcggaccaggcttcattccccccaac 94
>54793_vvi-miR166e:pmrd
Length = 166
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattcccc 155
>54791_vvi-miR166c:pmrd
Length = 160
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 128 gtcggaccaggcttcattcccc 149
>54790_vvi-miR166b:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccctcaa 122
|||||||||||||||||||| |||||
Sbjct: 67 gtcggaccaggcttcattcctctcaa 92
>54544_sly-miR166b:pmrd
Length = 201
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 153 gtcggaccaggcttcattcccc 174
>52289_ptc-miRf10467-akr:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 26 gtcggaccaggcttcattcccc 5
>52014_ptc-miRf10192-akr:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 107 gtcggaccaggcttcattcccc 128
>51856_ptc-miRf10034-akr:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||| ||||
Sbjct: 72 tcggaccaggcttcattccccccaac 97
>51635_ptc-miR166k:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattcccc 134
>51634_ptc-miR166j:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 113 gtcggaccaggcttcattcccc 134
>51629_ptc-miR166e:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||| ||||
Sbjct: 77 tcggaccaggcttcattccccccaac 102
>51627_ptc-miR166c:pmrd
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 104 gtcggaccaggcttcattcccc 125
>51625_ptc-miR166a:pmrd
Length = 164
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 134 gtcggaccaggcttcattcccc 155
>51558_pta-miR166a:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 65 gtcggaccaggcttcattcccc 86
>51379_ppt-miR166l:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 cggaccaggcttcattcccctc 120
||||||||||||||||||||||
Sbjct: 85 cggaccaggcttcattcccctc 106
>51378_ppt-miR166k:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 cggaccaggcttcattcccctc 120
||||||||||||||||||||||
Sbjct: 79 cggaccaggcttcattcccctc 100
>51377_ppt-miR166j:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 cggaccaggcttcattcccctc 120
||||||||||||||||||||||
Sbjct: 83 cggaccaggcttcattcccctc 104
>51376_ppt-miR166i:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccct 119
||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccct 95
>51375_ppt-miR166h:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccct 119
||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccct 99
>48789_nsy-miR166:pmrd
Length = 187
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 161 gtcggaccaggcttcattcccc 182
>48548_gma-miR166a:pmrd
Length = 146
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 106 gtcggaccaggcttcattcccc 127
>48495_ghr-miR166b:pmrd
Length = 154
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 129 gtcggaccaggcttcattcccc 150
>48494_ghr-miR166a:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 126 gtcggaccaggcttcattcccc 147
>48427_cpt-miR166:pmrd
Length = 160
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 128 gtcggaccaggcttcattcccc 149
>48342_bna-miR166a:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 110 gtcggaccaggcttcattcccc 131
>48299_ath-miRf11199-akr:pmrd
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 114 gtcggaccaggcttcattcccc 135
>46948_ath-miR166d:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 98 tcggaccaggcttcattcccctcaac 123
||||||||||||||||||||| ||||
Sbjct: 87 tcggaccaggcttcattccccccaac 112
>46946_ath-miR166b:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gtcggaccaggcttcattcccc 118
||||||||||||||||||||||
Sbjct: 95 gtcggaccaggcttcattcccc 116
