miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32829_rno-mir-295-1:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  cattttggtgagactcaaatgtggggcacacttctggattatgcgtagaaagtgctacta 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cattttggtgagactcaaatgtggggcacacttctggattatgcgtagaaagtgctacta 60

                               
Query: 61 cttttgggtgtctcctgtggg 81
          |||||||||||||||||||||
Sbjct: 61 cttttgggtgtctcctgtggg 81




>31965_mmu-mir-295:mirbase
          Length = 69

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                      
Query: 7  ggtgagactcaaatgtggggcacacttctggattatgcgtagaaagtgctactacttttg 66
          |||||||||||||||||||||||||||||||| | | | |||||||||||||||||||||
Sbjct: 1  ggtgagactcaaatgtggggcacacttctggactgtacatagaaagtgctactacttttg 60

                   
Query: 67 ggtgtctcc 75
           || |||||
Sbjct: 61 agtctctcc 69