miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00766;mir-335;AAGW01323748.1/3556-3648 9986:Oryctolagus
cuniculus (rabbit)
Length = 93
Score = 123 bits (62), Expect = 4e-28
Identities = 81/87 (93%), Gaps = 4/87 (4%)
Strand = Plus / Plus
Query: 1 tcttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgttttt 60
||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1 tcttttgggcgggagtcaagagcaataacgaaaaatgtttgt----cataaaccgttttt 56
Query: 61 cattattgctcctgacctcctctcatt 87
|||||||||||||||||||||||||||
Sbjct: 57 cattattgctcctgacctcctctcatt 83
>RF00766;mir-335;ABRQ01225307.1/3130-3038 9813:Procavia capensis
(cape rock hyrax)
Length = 93
Score = 61.9 bits (31), Expect = 1e-09
Identities = 68/80 (85%), Gaps = 4/80 (5%)
Strand = Plus / Plus
Query: 1 tcttttgggcgggggtcaagagcaataacgaaaaatgtttgtttttcgtaaaccgttttt 60
||||||||| |||||||||||||||||||| |||| ||| ||| |||| ||||||
Sbjct: 1 tcttttgggtgggggtcaagagcaataacggaaaacgttggtt----agaaactgttttt 56
Query: 61 cattattgctcctgacctcc 80
||||| ||||||||||||||
Sbjct: 57 cattactgctcctgacctcc 76
