miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00641;mir-154;ABRQ01054376.1/1652-1731 9813:Procavia capensis
(cape rock hyrax)
Length = 80
Score = 151 bits (76), Expect = 2e-36
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 ggtacttgaagagaagttgttcgtggtggattcgctttacttgtgacgaatcattcacgg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 ggtacttgaagagaagttgttcgtggtggattcgctttacttatgacgaatcattcacgg 60
Query: 61 acaacacttttttcagtacc 80
||||||||||||||||||||
Sbjct: 61 acaacacttttttcagtacc 80
>RF00641;mir-154;ABRQ01054377.1/1437-1516 9813:Procavia capensis
(cape rock hyrax)
Length = 80
Score = 48.1 bits (24), Expect = 2e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 1 ggtacttgaagagaagttgttcgtggtggattcgctttacttgtgacgaatcattcacgg 60
|||||||||||| | ||| | |||| || ||||||||| |||||||||||||| |||||
Sbjct: 1 ggtacttgaagataggttatccgtgttgccttcgctttatttgtgacgaatcatacacgg 60
>RF00641;mir-154;ABRR01391432.1/49-127 30538:Lama pacos (alpaca)
Length = 79
Score = 46.1 bits (23), Expect = 7e-05
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 22 cgtggtggattcgctttacttgtgacgaatcattcacggacaacacttttttcagtacc 80
||||| |||||| ||||||| || |||| |||| ||||||||| |||||||||||||
Sbjct: 21 cgtgggggattcactttactgaggaggaatgattcgcggacaacaattttttcagtacc 79
