miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32056_mmu-mir-383:mirbase
Length = 70
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 3 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 60
Query: 63 tcagaaagag 72
||||||||||
Sbjct: 61 tcagaaagag 70
>27165_eca-mir-383:mirbase
Length = 73
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcct 61
Query: 61 ggtcagaaagag 72
||||||||||||
Sbjct: 62 ggtcagaaagag 73
>27889_mml-mir-383:mirbase
Length = 73
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcct 61
Query: 61 ggtcagaaagag 72
||||||||||||
Sbjct: 62 ggtcagaaagag 73
>28636_hsa-mir-383:mirbase
Length = 73
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcct 61
Query: 61 ggtcagaaagag 72
||||||||||||
Sbjct: 62 ggtcagaaagag 73
>30990_ppy-mir-383:mirbase
Length = 73
Score = 135 bits (68), Expect = 5e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcct 61
Query: 61 ggtcagaaagag 72
||||||||||||
Sbjct: 62 ggtcagaaagag 73
>30363_ptr-mir-383:mirbase
Length = 72
Score = 133 bits (67), Expect = 2e-32
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcctcagatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcct 61
Query: 61 ggtcagaaaga 71
|||||||||||
Sbjct: 62 ggtcagaaaga 72
>34086_ssc-mir-383:mirbase
Length = 82
Score = 131 bits (66), Expect = 7e-32
Identities = 72/74 (97%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6 tcctcagatcagaaggtgattgtggctttgggtagatattaatcagccacagcactgcct 65
Query: 61 ggtcagaaagagca 74
||||||||||||||
Sbjct: 66 ggtcagaaagagca 79
>33360_bta-mir-383:mirbase
Length = 73
Score = 127 bits (64), Expect = 1e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2 tcctcagatcagaaggtgattgtggctttgggtggatatcaatcagccacagcactgcct 61
Query: 61 ggtcagaaagag 72
||||||||||||
Sbjct: 62 ggtcagaaagag 73
>26834_cfa-mir-383:mirbase
Length = 62
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 6 agatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctggtca 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatcagaaggtgattgtggctttgggtggatattaatcagccacagcactgcctggtca 60
Query: 66 ga 67
||
Sbjct: 61 ga 62
>25854_xtr-mir-383:mirbase
Length = 73
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||||
Sbjct: 2 tcctcagatcagaaggtgattgtggcttttagtagatattaagcagccacagcactgcct 61
Query: 61 ggtcagaaagag 72
||||||||||||
Sbjct: 62 ggtcagaaagag 73
>26025_gga-mir-383:mirbase
Length = 73
Score = 103 bits (52), Expect = 2e-23
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||| ||||| | |||||||||||||||||
Sbjct: 2 tcctcagatcagaaggtgattgtggctttgggtaaatattgagcagccacagcactgcct 61
Query: 61 ggtcagaaagag 72
||||||||||||
Sbjct: 62 ggtcagaaagag 73
>31550_oan-mir-383:mirbase
Length = 119
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| ||||||||||||| | || ||| |||||||| ||||||||
Sbjct: 27 tcctcagatcagaaggtgattgtggctttgggtagctactaagcagccacaacactgcct 86
Query: 61 ggtcagaaagagca 74
||||||||||||||
Sbjct: 87 ggtcagaaagagca 100
>26529_tgu-mir-383:mirbase
Length = 72
Score = 93.7 bits (47), Expect = 2e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 1 tcctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcct 60
||||||||||||||||||| |||||||||| || ||||||| |||||||||||||||||
Sbjct: 6 tcctcagatcagaaggtgattgtggctttgagtaaatattaagcagccacagcactgcct 65
Query: 61 ggtcaga 67
|||||||
Sbjct: 66 ggtcaga 72
>27448_mdo-mir-383:mirbase
Length = 70
Score = 67.9 bits (34), Expect = 9e-13
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 3 ctcagatcagaaggtgactgtggctttgggtggatattaatcagccacagcactgcctgg 62
||||||||||||||||| ||||||||| ||| || || | |||||||| ||||| ||||
Sbjct: 1 ctcagatcagaaggtgattgtggctttcggtagacatggaacagccacatcactggctgg 60
Query: 63 tcagaaagag 72
||||||||||
Sbjct: 61 tcagaaagag 70
