miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00841;mir-384;AAGU02394078.1/2220-2133 9785:Loxodonta africana
(African savanna elephant)
Length = 88
Score = 141 bits (71), Expect = 2e-33
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 6 aatcaggaattgtaaacaatttctaggcaatgtgtataatgtttataagtcattcctaga 65
Query: 61 aattgttcacaatgcctgtaaca 83
|||||||||||||||||||||||
Sbjct: 66 aattgttcacaatgcctgtaaca 88
>RF00841;mir-384;CABD01473817.2/805-921 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 117
Score = 77.8 bits (39), Expect = 2e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 1 aatcaggaattgtaaacaattcctaggcaatgtgtataatgttggtaagtcattcctaga 60
||||| ||||| |||||||||||||| |||| ||||||||||| |||||||||||||||
Sbjct: 6 aatcaagaattttaaacaattcctagacaatatgtataatgttcataagtcattcctaga 65
Query: 61 aat 63
|||
Sbjct: 66 aat 68
>RF00841;mir-384;ABVD01465411.1/385-284 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 102
Score = 46.1 bits (23), Expect = 7e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 6 ggaattgtaaacaattcctaggcaatgtgta 36
||||||||||| |||||| ||||||||||||
Sbjct: 11 ggaattgtaaataattccaaggcaatgtgta 41
