miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32061_mmu-mir-410:mirbase
Length = 81
Score = 151 bits (76), Expect = 8e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 1 acttgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 acttgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatg 64
Query: 61 gcctgttttcaatacc 76
||||||||||||||||
Sbjct: 65 gcctgttttcaatacc 80
>33363_bta-mir-410:mirbase
Length = 81
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 1 acttgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 acttgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatg 64
Query: 61 gcctgttttcaatacc 76
||||||||||| ||||
Sbjct: 65 gcctgttttcagtacc 80
>33838_oar-mir-410:mirbase
Length = 126
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 1 acttgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 acttgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatg 95
Query: 61 gcctgttttcaatacc 76
||||||||||| ||||
Sbjct: 96 gcctgttttcagtacc 111
>33839_oar-mir-410:mirbase
Length = 126
Score = 143 bits (72), Expect = 2e-35
Identities = 75/76 (98%)
Strand = Plus / Plus
Query: 1 acttgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 acttgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatg 95
Query: 61 gcctgttttcaatacc 76
||||||||||| ||||
Sbjct: 96 gcctgttttcagtacc 111
>27169_eca-mir-410:mirbase
Length = 74
Score = 129 bits (65), Expect = 3e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 4 tgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatggcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaggagaggttgtctgtgatgagttcgctttattaatgacgaatataacacagatggcc 60
Query: 64 tgttttcaatacc 76
||| |||| ||||
Sbjct: 61 tgtcttcagtacc 73
>27893_mml-mir-410:mirbase
Length = 80
Score = 123 bits (62), Expect = 2e-29
Identities = 72/74 (97%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 4 tgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacagatggc 62
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7 tgaggagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacagatggc 66
Query: 63 ctgttttcaatacc 76
||||||||| ||||
Sbjct: 67 ctgttttcagtacc 80
>28640_hsa-mir-410:mirbase
Length = 80
Score = 115 bits (58), Expect = 4e-27
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 4 tgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacagatggc 62
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7 tgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacagatggc 66
Query: 63 ctgttttcaatacc 76
||||||||| ||||
Sbjct: 67 ctgttttcagtacc 80
>30365_ptr-mir-410:mirbase
Length = 79
Score = 115 bits (58), Expect = 4e-27
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 4 tgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacagatggc 62
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6 tgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacagatggc 65
Query: 63 ctgttttcaatacc 76
||||||||| ||||
Sbjct: 66 ctgttttcagtacc 79
>30994_ppy-mir-410:mirbase
Length = 80
Score = 115 bits (58), Expect = 4e-27
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 4 tgaggagaggttgtctgtgatgagttcgcttt-attaatgacgaatataacacagatggc 62
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7 tgagaagaggttgtctgtgatgagttcgcttttattaatgacgaatataacacagatggc 66
Query: 63 ctgttttcaatacc 76
||||||||| ||||
Sbjct: 67 ctgttttcagtacc 80
>26837_cfa-mir-410:mirbase
Length = 56
Score = 103 bits (52), Expect = 2e-23
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 11 aggttgtctgtgatgagttcgctttattaatgacgaatataacacagatggcctgt 66
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 aggttgtctgtgatgagttcgctttattaatgccgaatataacacagatggcctgt 56
