miRNEST 2.0, an integrative microRNA resource :: BLAST
>32716_rno-mir-122:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Minus
Query: 12 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 26
Query: 72 gtcacactccagagctctgctaagg 96
|||||||||||||||||||||||||
Sbjct: 25 gtcacactccagagctctgctaagg 1
>28426_hsa-mir-122:mirbase
Length = 85
Score = 121 bits (61), Expect = 1e-28
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 12 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 71
|||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 85 gcctagcagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 26
Query: 72 gtcacactccagagctctgctaagg 96
||||||||||| |||||||||||||
Sbjct: 25 gtcacactccacagctctgctaagg 1
>30814_ppy-mir-122:mirbase
Length = 85
Score = 121 bits (61), Expect = 1e-28
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 12 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 71
|||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 85 gcctagcagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 26
Query: 72 gtcacactccagagctctgctaagg 96
||||||||||| |||||||||||||
Sbjct: 25 gtcacactccacagctctgctaagg 1
>33197_bta-mir-122:mirbase
Length = 85
Score = 121 bits (61), Expect = 1e-28
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 12 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 71
||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 85 gcctaacagtagctatttagtgtgataatggcgtttgatagtttggacacaaacaccatt 26
Query: 72 gtcacactccagagctctgctaagg 96
||||||||||| |||||||||||||
Sbjct: 25 gtcacactccacagctctgctaagg 1
>33967_ssc-mir-122:mirbase
Length = 85
Score = 121 bits (61), Expect = 1e-28
Identities = 79/85 (92%)
Strand = Plus / Minus
Query: 12 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 71
||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 85 gcctaacagtagctatttagtgtgataatggcgtttgatagtttggacacaaacaccatt 26
Query: 72 gtcacactccagagctctgctaagg 96
||||||||||| |||||||||||||
Sbjct: 25 gtcacactccacagctctgctaagg 1
>30207_ptr-mir-122:mirbase
Length = 84
Score = 119 bits (60), Expect = 4e-28
Identities = 78/84 (92%)
Strand = Plus / Minus
Query: 12 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 71
|||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 84 gcctagcagtagctatttagtgtgataatggcgtttgataatttagacacaaacaccatt 25
Query: 72 gtcacactccagagctctgctaag 95
||||||||||| ||||||||||||
Sbjct: 24 gtcacactccacagctctgctaag 1
>27714_mml-mir-122a:mirbase
Length = 85
Score = 113 bits (57), Expect = 3e-26
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 12 gcctagcagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccatt 71
|||||| ||||||| ||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 85 gcctagtagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccatt 26
Query: 72 gtcacactccagagctctgctaagg 96
||||||||||| |||||||||||||
Sbjct: 25 gtcacactccacagctctgctaagg 1
>31837_mmu-mir-122:mirbase
Length = 66
Score = 99.6 bits (50), Expect = 4e-22
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 22 agctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcacactcc 81
|||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66 agctatttagtgtgataatggcgtttgatggtttggacacaaacaccattgtcacactcc 7
Query: 82 agagct 87
| ||||
Sbjct: 6 acagct 1
>25937_gga-mir-122-1:mirbase
Length = 77
Score = 97.6 bits (49), Expect = 2e-21
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 18 cagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcaca 77
|||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 73 cagtagctatttagtgtgataatggcgtttgatagattggacacaaacaccattgtcaca 14
Query: 78 ctccagagctctg 90
||||| |||||||
Sbjct: 13 ctccacagctctg 1
>25938_gga-mir-122-2:mirbase
Length = 77
Score = 97.6 bits (49), Expect = 2e-21
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 18 cagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcaca 77
|||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 73 cagtagctatttagtgtgataatggcgtttgatagattggacacaaacaccattgtcaca 14
Query: 78 ctccagagctctg 90
||||| |||||||
Sbjct: 13 ctccatagctctg 1
>29379_hsa-mir-3591:mirbase
Length = 73
Score = 97.6 bits (49), Expect = 2e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 18 cagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcaca 77
|||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||||||
Sbjct: 1 cagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcaca 60
Query: 78 ctccagagctctg 90
||||| |||||||
Sbjct: 61 ctccacagctctg 73
>29380_hsa-mir-3591:mirbase
Length = 73
Score = 97.6 bits (49), Expect = 2e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 18 cagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcaca 77
|||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||||||
Sbjct: 1 cagtagctatttagtgtgataatggcgtttgatagtttagacacaaacaccattgtcaca 60
Query: 78 ctccagagctctg 90
||||| |||||||
Sbjct: 61 ctccacagctctg 73
>27006_eca-mir-122:mirbase
Length = 66
Score = 91.7 bits (46), Expect = 1e-19
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 22 agctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcacactcc 81
|||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 66 agctatttagtgtgataatggcgtttgatagtttggacacaaacaccattgtcacactcc 7
Query: 82 agagct 87
| ||||
Sbjct: 6 acagct 1
>27371_mdo-mir-122:mirbase
Length = 74
Score = 89.7 bits (45), Expect = 4e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 18 cagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcaca 77
|||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 73 cagtagctatttagtgtgataatggcgtttgatagactggacacaaacaccattgtcaca 14
Query: 78 ctccagagctctg 90
||||| |||||||
Sbjct: 13 ctccatagctctg 1
>31478_oan-mir-122:mirbase
Length = 111
Score = 89.7 bits (45), Expect = 4e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 18 cagtagctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcaca 77
|||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 93 cagtagctatttagtgtgataatggcgtttgatagactggacacaaacaccattgtcaca 34
Query: 78 ctccagagctctg 90
||||| |||||||
Sbjct: 33 ctccacagctctg 21
>26685_cfa-mir-122:mirbase
Length = 58
Score = 87.7 bits (44), Expect = 2e-18
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 27 tttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcacactcca 82
||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 56 tttagtgtgataatggcgtttgatagtttggacacaaacaccattgtcacactcca 1
>26449_tgu-mir-122:mirbase
Length = 72
Score = 71.9 bits (36), Expect = 9e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 27 tttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcacactccagagc 86
||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 65 tttagtgtgataatggcgtttgat-agatggacacaaacaccattgtcacactccacagc 7
Query: 87 tctg 90
||||
Sbjct: 6 tctg 3
>25762_xtr-mir-122:mirbase
Length = 69
Score = 65.9 bits (33), Expect = 6e-12
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 28 ttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcacactccagagct 87
|||||||||| |||||||||||| | |||||||||||||||||||||||||| ||||
Sbjct: 61 ttagtgtgataatggcgtttgatagctctgacacaaacaccattgtcacactccatagct 2
Query: 88 c 88
|
Sbjct: 1 c 1
>34731_tni-mir-122:mirbase
Length = 66
Score = 60.0 bits (30), Expect = 4e-10
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 22 agctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcacactcc 81
|||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 66 agctatttagtgtgataatggcgtttgaaagaaaggacacaaacaccattgtcacactcc 7
Query: 82 agagct 87
| ||||
Sbjct: 6 acagct 1
>34270_dre-mir-122:mirbase
Length = 76
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 60 acaaacaccattgtcacactccagagctctg 90
||||||||||||||||||||||| |||||||
Sbjct: 33 acaaacaccattgtcacactccacagctctg 3
>34584_fru-mir-122:mirbase
Length = 66
Score = 52.0 bits (26), Expect = 9e-08
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 22 agctgtttagtgtgatgatggcgtttgatgttttggacacaaacaccattgtcacactcc 81
|||| ||||||||||| ||||||||||| ||| ||||||||||||||||||||||
Sbjct: 66 agctatttagtgtgataatggcgtttgaaagaaaggaaacaaacaccattgtcacactcc 7
Query: 82 agagct 87
| ||||
Sbjct: 6 atagct 1
>34199_dre-mir-10b-2:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 45 tttgatgttttggacacaaa 64
||||||||||||||||||||
Sbjct: 52 tttgatgttttggacacaaa 33
