miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00641;mir-154;ABRQ01054376.1/1652-1731 9813:Procavia capensis
(cape rock hyrax)
Length = 80
Score = 151 bits (76), Expect = 2e-36
Identities = 79/80 (98%)
Strand = Plus / Minus
Query: 20 ggtactgaaaaaagtgttgtccgtgaatgattcgtcacaagtaaagcgaatccaccacga 79
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 80 ggtactgaaaaaagtgttgtccgtgaatgattcgtcataagtaaagcgaatccaccacga 21
Query: 80 acaacttctcttcaagtacc 99
||||||||||||||||||||
Sbjct: 20 acaacttctcttcaagtacc 1
>RF00641;mir-154;ABRQ01054377.1/1437-1516 9813:Procavia capensis
(cape rock hyrax)
Length = 80
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 40 ccgtgaatgattcgtcacaagtaaagcgaatccaccacgaacaacttctcttcaagtacc 99
||||| |||||||||||||| ||||||||| || |||| | ||| | ||||||||||||
Sbjct: 60 ccgtgtatgattcgtcacaaataaagcgaaggcaacacggataacctatcttcaagtacc 1
>RF00641;mir-154;ABRR01391432.1/49-127 30538:Lama pacos (alpaca)
Length = 79
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 20 ggtactgaaaaaagtgttgtccgtgaatgattcgtcacaagtaaagcgaatccaccacg 78
||||||||||||| ||||||||| |||| |||| || ||||||| |||||| |||||
Sbjct: 79 ggtactgaaaaaattgttgtccgcgaatcattcctcctcagtaaagtgaatcccccacg 21
