miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32889_rno-mir-376a:mirbase
Length = 82
Score = 163 bits (82), Expect = 4e-41
Identities = 82/82 (100%)
Strand = Plus / Minus
Query: 21 tgatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaagg 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 tgatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaagg 23
Query: 81 agaatctaccttttaaatatca 102
||||||||||||||||||||||
Sbjct: 22 agaatctaccttttaaatatca 1
>33817_oar-mir-376a:mirbase
Length = 103
Score = 149 bits (75), Expect = 5e-37
Identities = 93/99 (93%)
Strand = Plus / Minus
Query: 9 ccaagcagcatttgatactgaaaacgtggattttcctctacgattagtcattaatattgt 68
|||||||||||||||||||||||||||||||||||||||| ||||| || | |||| |||
Sbjct: 102 ccaagcagcatttgatactgaaaacgtggattttcctctatgattaatcgtaaataatgt 43
Query: 69 actcatagaaggagaatctaccttttaaatatcaaagaa 107
||||||||||||||||||||||||||||||| |||||||
Sbjct: 42 actcatagaaggagaatctaccttttaaataccaaagaa 4
>33818_oar-mir-376a:mirbase
Length = 103
Score = 149 bits (75), Expect = 5e-37
Identities = 93/99 (93%)
Strand = Plus / Minus
Query: 9 ccaagcagcatttgatactgaaaacgtggattttcctctacgattagtcattaatattgt 68
|||||||||||||||||||||||||||||||||||||||| ||||| || | |||| |||
Sbjct: 102 ccaagcagcatttgatactgaaaacgtggattttcctctatgattaatcgtaaataatgt 43
Query: 69 actcatagaaggagaatctaccttttaaatatcaaagaa 107
||||||||||||||||||||||||||||||| |||||||
Sbjct: 42 actcatagaaggagaatctaccttttaaataccaaagaa 4
>33348_bta-mir-376a:mirbase
Length = 99
Score = 139 bits (70), Expect = 5e-34
Identities = 88/94 (93%)
Strand = Plus / Minus
Query: 14 cagcatttgatactgaaaacgtggattttcctctacgattagtcattaatattgtactca 73
||||||||||||||||||||||||||||||||||| ||||| || | |||| ||||||||
Sbjct: 99 cagcatttgatactgaaaacgtggattttcctctatgattaatcgtaaataatgtactca 40
Query: 74 tagaaggagaatctaccttttaaatatcaaagaa 107
|||||||||||||||||||||||||| |||||||
Sbjct: 39 tagaaggagaatctaccttttaaataccaaagaa 6
>32045_mmu-mir-376a:mirbase
Length = 68
Score = 135 bits (68), Expect = 8e-33
Identities = 68/68 (100%)
Strand = Plus / Minus
Query: 28 gaaaacgtggattttcctctacgattagtcattaatattgtactcatagaaggagaatct 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gaaaacgtggattttcctctacgattagtcattaatattgtactcatagaaggagaatct 9
Query: 88 acctttta 95
||||||||
Sbjct: 8 acctttta 1
>34079_ssc-mir-376a:mirbase
Length = 80
Score = 115 bits (58), Expect = 8e-27
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 22 gatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaagga 81
||||||||||||||||||||||||||| ||||| | || |||| ||||||||||||||||
Sbjct: 80 gatactgaaaacgtggattttcctctatgattaataataaataatgtactcatagaagga 21
Query: 82 gaatctaccttttaaata 99
||||||||||||||||||
Sbjct: 20 gaatctaccttttaaata 3
>27156_eca-mir-376a:mirbase
Length = 68
Score = 111 bits (56), Expect = 1e-25
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 28 gaaaacgtggattttcctctacgattagtcattaatattgtactcatagaaggagaatct 87
||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||
Sbjct: 68 gaaaacgtggattttcctctatgattaatcataaatattgtactcatagaaggagaatct 9
Query: 88 acctttta 95
||||||||
Sbjct: 8 acctttta 1
>27879_mml-mir-376a-1:mirbase
Length = 68
Score = 103 bits (52), Expect = 3e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 28 gaaaacgtggattttcctctacgattagtcattaatattgtactcatagaaggagaatct 87
||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||
Sbjct: 68 gaaaacgtggattttcctctatgattaatcataaataatgtactcatagaaggagaatct 9
Query: 88 acctttta 95
||||||||
Sbjct: 8 acctttta 1
>28617_hsa-mir-376a-1:mirbase
Length = 68
Score = 103 bits (52), Expect = 3e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 28 gaaaacgtggattttcctctacgattagtcattaatattgtactcatagaaggagaatct 87
||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||
Sbjct: 68 gaaaacgtggattttcctctatgattaatcataaataatgtactcatagaaggagaatct 9
Query: 88 acctttta 95
||||||||
Sbjct: 8 acctttta 1
>30980_ppy-mir-376a-1:mirbase
Length = 68
Score = 103 bits (52), Expect = 3e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 28 gaaaacgtggattttcctctacgattagtcattaatattgtactcatagaaggagaatct 87
||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||
Sbjct: 68 gaaaacgtggattttcctctatgattaatcataaataatgtactcatagaaggagaatct 9
Query: 88 acctttta 95
||||||||
Sbjct: 8 acctttta 1
>30353_ptr-mir-376a-1:mirbase
Length = 67
Score = 101 bits (51), Expect = 1e-22
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 28 gaaaacgtggattttcctctacgattagtcattaatattgtactcatagaaggagaatct 87
||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||
Sbjct: 67 gaaaacgtggattttcctctatgattaatcataaataatgtactcatagaaggagaatct 8
Query: 88 acctttt 94
|||||||
Sbjct: 7 acctttt 1
>26823_cfa-mir-376a-1:mirbase
Length = 58
Score = 83.8 bits (42), Expect = 3e-17
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 32 acgtggattttcctctacgattagtcattaatattgtactcatagaaggagaatctac 89
||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||
Sbjct: 58 acgtggattttcctctatgattaatcataaataatgtactcatagaaggagaatctac 1
>33823_oar-mir-376d:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 3e-17
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 11 aagcagcatttgatactgaaaacgtggattttcctctacgattagtcattaatattgtac 70
|||||||||||||||||||||| ||||||||||||||| ||||| ||| || |||
Sbjct: 107 aagcagcatttgatactgaaaatgtggattttcctctatgattaatcaccaaacccgtaa 48
Query: 71 tcatagaaggagaatctaccttttaaatatcaaa 104
|||||||||| ||||||||||||||||| ||||
Sbjct: 47 ccatagaaggaaaatctaccttttaaataccaaa 14
>33821_oar-mir-376c:mirbase
Length = 105
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 9 ccaagcagcatttgatactgaaaacgtggattttcctcta 48
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 103 ccaagcagcatttgatactgaaaacgtggaatttcctcta 64
>33822_oar-mir-376c:mirbase
Length = 105
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 9 ccaagcagcatttgatactgaaaacgtggattttcctcta 48
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 103 ccaagcagcatttgatactgaaaacgtggaatttcctcta 64
>26826_cfa-mir-376b:mirbase
Length = 99
Score = 67.9 bits (34), Expect = 2e-12
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 14 cagcatttgatactgaaaacgtggattttcctctacgattagtcattaatattgtactca 73
|||||||||||||||||||| |||||||||||||| ||||| || ||| ||| ||
Sbjct: 99 cagcatttgatactgaaaacatggattttcctctatgattatctatgaatcacgtaaaca 40
Query: 74 tagaaggagaatctaccttttaaatatcaaagaa 107
|||||||| ||| |||||||||||| |||||||
Sbjct: 39 tagaaggaatatccaccttttaaataccaaagaa 6
>27880_mml-mir-376a-2:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 22 gatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaagga 81
||||||||||||||||||||||||||| ||||| ||| || ||| ||||||||||
Sbjct: 80 gatactgaaaacgtggattttcctctatgattaaccatcaaacacgtaaccatagaagga 21
Query: 82 gaatctaccttttaaata 99
|||||||||||||||||
Sbjct: 20 aaatctaccttttaaata 3
>28618_hsa-mir-376a-2:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 22 gatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaagga 81
||||||||||||||||||||||||||| ||||| ||| || ||| ||||||||||
Sbjct: 80 gatactgaaaacgtggattttcctctatgattaaccatcaaacacgtaaccatagaagga 21
Query: 82 gaatctaccttttaaata 99
|||||||||||||||||
Sbjct: 20 aaatctaccttttaaata 3
>30354_ptr-mir-376a-2:mirbase
Length = 79
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 22 gatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaagga 81
||||||||||||||||||||||||||| ||||| ||| || ||| ||||||||||
Sbjct: 79 gatactgaaaacgtggattttcctctatgattaaccatcaaacacgtaaccatagaagga 20
Query: 82 gaatctaccttttaaata 99
|||||||||||||||||
Sbjct: 19 aaatctaccttttaaata 2
>30981_ppy-mir-376a-2:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 22 gatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaagga 81
||||||||||||||||||||||||||| ||||| ||| || ||| ||||||||||
Sbjct: 80 gatactgaaaacgtggattttcctctatgattaaccatcaaacacgtaaccatagaagga 21
Query: 82 gaatctaccttttaaata 99
|||||||||||||||||
Sbjct: 20 aaatctaccttttaaata 3
>27881_mml-mir-376b:mirbase
Length = 100
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 cagcatttgatactgaaaacgtggattttcctctacgatta 54
|||||||||||||||||||| |||||||||||||| |||||
Sbjct: 100 cagcatttgatactgaaaacatggattttcctctatgatta 60
>28619_hsa-mir-376b:mirbase
Length = 100
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 cagcatttgatactgaaaacgtggattttcctctacgatta 54
|||||||||||||||||||| |||||||||||||| |||||
Sbjct: 100 cagcatttgatactgaaaacatggattttcctctatgatta 60
>30355_ptr-mir-376b:mirbase
Length = 99
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 cagcatttgatactgaaaacgtggattttcctctacgatta 54
|||||||||||||||||||| |||||||||||||| |||||
Sbjct: 99 cagcatttgatactgaaaacatggattttcctctatgatta 59
>30982_ppy-mir-376b:mirbase
Length = 100
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 14 cagcatttgatactgaaaacgtggattttcctctacgatta 54
|||||||||||||||||||| |||||||||||||| |||||
Sbjct: 100 cagcatttgatactgaaaacatggattttcctctatgatta 60
>33349_bta-mir-376b:mirbase
Length = 93
Score = 65.9 bits (33), Expect = 6e-12
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 15 agcatttgatactgaaaacgtggattttcctctacgattagtcattaatattgtactcat 74
||||||||||||||||||| |||||||||||||| ||||| || ||| ||| |||
Sbjct: 93 agcatttgatactgaaaacatggattttcctctatgattatctatgaatcacgtaaacat 34
Query: 75 agaaggagaatctaccttttaaatatcaaagaa 107
||||||| ||| |||||||||||| |||||||
Sbjct: 33 agaaggaatatccaccttttaaataccaaagaa 1
>33819_oar-mir-376b:mirbase
Length = 106
Score = 65.9 bits (33), Expect = 6e-12
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 15 agcatttgatactgaaaacgtggattttcctctacgattagtcattaatattgtactcat 74
||||||||||||||||||| |||||||||||||| ||||| || ||| ||| |||
Sbjct: 98 agcatttgatactgaaaacatggattttcctctatgattatctatgaatcacgtaaacat 39
Query: 75 agaaggagaatctaccttttaaatatcaaagaa 107
||||||| ||| |||||||||||| |||||||
Sbjct: 38 agaaggaatatccaccttttaaataccaaagaa 6
>33820_oar-mir-376b:mirbase
Length = 106
Score = 65.9 bits (33), Expect = 6e-12
Identities = 78/93 (83%)
Strand = Plus / Minus
Query: 15 agcatttgatactgaaaacgtggattttcctctacgattagtcattaatattgtactcat 74
||||||||||||||||||| |||||||||||||| ||||| || ||| ||| |||
Sbjct: 98 agcatttgatactgaaaacatggattttcctctatgattatctatgaatcacgtaaacat 39
Query: 75 agaaggagaatctaccttttaaatatcaaagaa 107
||||||| ||| |||||||||||| |||||||
Sbjct: 38 agaaggaatatccaccttttaaataccaaagaa 6
>33351_bta-mir-376d:mirbase
Length = 82
Score = 63.9 bits (32), Expect = 3e-11
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 20 ttgatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaag 79
||||||| ||||| ||||||||||||||| ||||| ||| || ||| |||||||||
Sbjct: 82 ttgataccgaaaatgtggattttcctctatgattaatcaccaaacccgtaatcatagaag 23
Query: 80 gagaatctaccttttaaata 99
|| |||||||||||||||||
Sbjct: 22 gaaaatctaccttttaaata 3
>26827_cfa-mir-376c:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 19 tttgatactgaaaacgtggattttcctcta 48
|||||||||||||||||||| |||||||||
Sbjct: 86 tttgatactgaaaacgtggaatttcctcta 57
>27157_eca-mir-376b:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 21 tgatactgaaaacgtggattttcctctacgatta 54
||||||||||||| |||||||||||||| |||||
Sbjct: 82 tgatactgaaaacatggattttcctctatgatta 49
>33350_bta-mir-376c:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 19 tttgatactgaaaacgtggattttcctcta 48
|||||||||||||||||||| |||||||||
Sbjct: 86 tttgatactgaaaacgtggaatttcctcta 57
>32890_rno-mir-376b:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 19 tttgatactgaaaacgtggattttcctctacgatta 54
|||||||||||||| |||||| |||||||| |||||
Sbjct: 86 tttgatactgaaaaagtggatgttcctctatgatta 51
>32891_rno-mir-376b:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 19 tttgatactgaaaacgtggattttcctctacgatta 54
|||||||||||||| |||||| |||||||| |||||
Sbjct: 86 tttgatactgaaaaagtggatgttcctctatgatta 51
>34080_ssc-mir-376b:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 gatactgaaaacgtggattttcctcta 48
||||||||||||||||| |||||||||
Sbjct: 78 gatactgaaaacgtggaatttcctcta 52
>34081_ssc-mir-376c:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 gatactgaaaacgtggattttcctcta 48
||||||||||||||||| |||||||||
Sbjct: 78 gatactgaaaacgtggaatttcctcta 52
>32046_mmu-mir-376b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 21 tgatactgaaaacgtggattttcctctacgatta 54
|||||||||||| |||||| |||||||| |||||
Sbjct: 82 tgatactgaaaaagtggatgttcctctatgatta 49
>32892_rno-mir-376c:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 65/80 (81%)
Strand = Plus / Minus
Query: 20 ttgatactgaaaacgtggattttcctctacgattagtcattaatattgtactcatagaag 79
|||| |||||||||||| | ||||||||| | ||| |||| |||| || ||||||||
Sbjct: 84 ttgacactgaaaacgtgaaatttcctctatgtttaatcataaataccataaacatagaag 25
Query: 80 gagaatctaccttttaaata 99
|| ||| ||||||||||||
Sbjct: 24 gaatatccaccttttaaata 5
