miRNEST 2.0, an integrative microRNA resource :: BLAST
>26661_cfa-mir-33:mirbase
Length = 61
Score = 121 bits (61), Expect = 6e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcatc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcatc 60
Query: 66 a 66
|
Sbjct: 61 a 61
>26982_eca-mir-33a:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcat 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggcggtacccatgcaatgtttccacagtgcat 64
Query: 65 cacag 69
|||||
Sbjct: 65 cacag 69
>30789_ppy-mir-33:mirbase
Length = 69
Score = 121 bits (61), Expect = 6e-29
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 1 ctgcggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagt 60
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 1 ctgcggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagt 60
Query: 61 gcatcacag 69
|||||||||
Sbjct: 61 gcatcacag 69
>27689_mml-mir-33a:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 ctgcggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagt 60
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 1 ctgcggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagt 60
Query: 61 gcatcacag 69
|||| ||||
Sbjct: 61 gcattacag 69
>28196_mne-mir-33:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 ctgcggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagt 60
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 1 ctgcggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagt 60
Query: 61 gcatcacag 69
|||| ||||
Sbjct: 61 gcattacag 69
>28284_ggo-mir-33:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcat 64
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
Query: 65 cacag 69
|||||
Sbjct: 65 cacag 69
>28399_hsa-mir-33a:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcat 64
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
Query: 65 cacag 69
|||||
Sbjct: 65 cacag 69
>30071_ppa-mir-33:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcat 64
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
Query: 65 cacag 69
|||||
Sbjct: 65 cacag 69
>30185_ptr-mir-33a:mirbase
Length = 69
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcat 64
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggtggtacccatgcaatgtttccacagtgcat 64
Query: 65 cacag 69
|||||
Sbjct: 65 cacag 69
>32696_rno-mir-33:mirbase
Length = 69
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcat 64
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggcagtacctgtgcaatgtttccacagtgcat 64
Query: 65 cac 67
|||
Sbjct: 65 cac 67
>31814_mmu-mir-33:mirbase
Length = 69
Score = 101 bits (51), Expect = 6e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcat 64
||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgttctggcaatacctgtgcaatgtttccacagtgcat 64
Query: 65 cac 67
|||
Sbjct: 65 cac 67
>31460_oan-mir-33b:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 5e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcatc 65
||||||||||||||||||||| |||| ||| |||| |||||||||| |||||||||||
Sbjct: 14 gtgcattgtagttgcattgcacgttccggcagtactggtgcaatgttcccacagtgcatt 73
Query: 66 acag 69
||||
Sbjct: 74 acag 77
>31461_oan-mir-33b:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 5e-14
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgcatc 65
||||||||||||||||||||| |||| ||| |||| |||||||||| |||||||||||
Sbjct: 14 gtgcattgtagttgcattgcacgttccggcagtactggtgcaatgttcccacagtgcatt 73
Query: 66 acag 69
||||
Sbjct: 74 acag 77
>25924_gga-mir-33:mirbase
Length = 69
Score = 61.9 bits (31), Expect = 5e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtt 52
|||||||||||||||||||||||| ||||| ||| | ||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatgtgctggcagtaactgtgcaatgtt 52
>26431_tgu-mir-33:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 2e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgttctggcggtacccgtgcaatgtttccacagtgca 63
||||||||||||||||||||||||| |||| || | |||||||||||| |||||||
Sbjct: 11 gtgcattgtagttgcattgcatgttgtggcagtgactgtgcaatgtttctgcagtgca 68
>37721_tca-mir-33:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgtt 30
||||||||||||||||||||||||||
Sbjct: 24 ggtgcattgtagttgcattgcatgtt 49
>37722_tca-mir-33:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgtt 30
||||||||||||||||||||||||||
Sbjct: 24 ggtgcattgtagttgcattgcatgtt 49
>24657_bfl-mir-33-1:mirbase
Length = 82
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgt 29
|||||||||||||||||||||||||
Sbjct: 6 ggtgcattgtagttgcattgcatgt 30
>24658_bfl-mir-33-2:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgt 29
|||||||||||||||||||||||||
Sbjct: 15 ggtgcattgtagttgcattgcatgt 39
>25740_xtr-mir-33a:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgt 29
|||||||||||||||||||||||||
Sbjct: 5 ggtgcattgtagttgcattgcatgt 29
>27359_mdo-mir-33:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 ccgtgcaatgtttccacagtgcatc 65
|||||||||||||||||||||||||
Sbjct: 36 ccgtgcaatgtttccacagtgcatc 60
>38738_cte-mir-33:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatg 28
||||||||||||||||||||||||
Sbjct: 20 ggtgcattgtagttgcattgcatg 43
>31458_oan-mir-33a:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgt 29
||||||||||||||||||||||||
Sbjct: 22 gtgcattgtagttgcattgcatgt 45
>31459_oan-mir-33a:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatgt 29
||||||||||||||||||||||||
Sbjct: 22 gtgcattgtagttgcattgcatgt 45
>38857_lgi-mir-33:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcat 27
|||||||||||||||||||||||
Sbjct: 20 ggtgcattgtagttgcattgcat 42
>35357_ame-mir-33:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatg 28
|||||||||||||||||||||||
Sbjct: 31 gtgcattgtagttgcattgcatg 53
>37644_nvi-mir-33:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgcatg 28
|||||||||||||||||||||||
Sbjct: 31 gtgcattgtagttgcattgcatg 53
>35183_aae-mir-33:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgca 26
||||||||||||||||||||||
Sbjct: 8 ggtgcattgtagttgcattgca 29
>36014_cqu-mir-33:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgca 26
||||||||||||||||||||||
Sbjct: 2 ggtgcattgtagttgcattgca 23
>24815_cin-mir-33:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgca 26
|||||||||||||||||||||
Sbjct: 16 gtgcattgtagttgcattgca 36
>25741_xtr-mir-33b:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcatgt 29
|||||||||| ||||||||||||||
Sbjct: 5 ggtgcattgttgttgcattgcatgt 29
>35004_dpu-mir-33:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgca 26
|||||||||||||||||||||
Sbjct: 21 gtgcattgtagttgcattgca 41
>35530_bmo-mir-33:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 gtgcattgtagttgcattgca 26
|||||||||||||||||||||
Sbjct: 11 gtgcattgtagttgcattgca 31
>25464_pma-mir-33a:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattg 24
||||||||||||||||||||
Sbjct: 15 ggtgcattgtagttgcattg 34
>33174_bta-mir-33b:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 3 gcggtgcattgtagttgcattgcatgt 29
||||||||||| ||||||||||||||
Sbjct: 13 gcggtgcattgctgttgcattgcatgt 39
>34814_spu-mir-33:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 5 ggtgcattgtagttgcattgcat 27
|||||||||| ||||||||||||
Sbjct: 20 ggtgcattgtcgttgcattgcat 42
