miRNEST 2.0, an integrative microRNA resource :: BLAST
>26994_eca-mir-98:mirbase
Length = 119
Score = 188 bits (95), Expect = 6e-49
Identities = 113/119 (94%)
Strand = Plus / Plus
Query: 1 aggactctgctcatgctggggtgaggtagtaagttgtattgttgtggggtagggatttta 60
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggattctgctcatgccagggtgaggtagtaagttgtattgttgtggggtagggatttta 60
Query: 61 ggccccaatttgaagataactatacaacttactactttccctggtgtgtagcacattca 119
|||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 61 ggccccaattagaagataactatacaacttactactttccctggtgtgtggcatattca 119
>28411_hsa-mir-98:mirbase
Length = 119
Score = 180 bits (91), Expect = 2e-46
Identities = 112/119 (94%)
Strand = Plus / Plus
Query: 1 aggactctgctcatgctggggtgaggtagtaagttgtattgttgtggggtagggatttta 60
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 aggattctgctcatgccagggtgaggtagtaagttgtattgttgtggggtagggatatta 60
Query: 61 ggccccaatttgaagataactatacaacttactactttccctggtgtgtagcacattca 119
|||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 61 ggccccaattagaagataactatacaacttactactttccctggtgtgtggcatattca 119
>30195_ptr-mir-98:mirbase
Length = 119
Score = 180 bits (91), Expect = 2e-46
Identities = 112/119 (94%)
Strand = Plus / Plus
Query: 1 aggactctgctcatgctggggtgaggtagtaagttgtattgttgtggggtagggatttta 60
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 aggattctgctcatgccagggtgaggtagtaagttgtattgttgtggggtagggatatta 60
Query: 61 ggccccaatttgaagataactatacaacttactactttccctggtgtgtagcacattca 119
|||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 61 ggccccaattagaagataactatacaacttactactttccctggtgtgtggcatattca 119
>32705_rno-mir-98:mirbase
Length = 108
Score = 180 bits (91), Expect = 2e-46
Identities = 100/103 (97%)
Strand = Plus / Plus
Query: 7 ctgctcatgctggggtgaggtagtaagttgtattgttgtggggtagggattttaggcccc 66
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcacatgctggggtgaggtagtaagttgtattgttgtggggtagggattttaggcccc 60
Query: 67 aatttgaagataactatacaacttactactttccctggtgtgt 109
||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aataagaagataactatacaacttactactttccctggtgtgt 103
>31824_mmu-mir-98:mirbase
Length = 108
Score = 165 bits (83), Expect = 9e-42
Identities = 98/103 (95%)
Strand = Plus / Plus
Query: 7 ctgctcatgctggggtgaggtagtaagttgtattgttgtggggtagggattttaggcccc 66
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcacatgctggggtgaggtagtaagttgtattgttgtggggtagggattttaggcccc 60
Query: 67 aatttgaagataactatacaacttactactttccctggtgtgt 109
| | ||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 agtaagaagataactatacaacttactactttccttggtgtgt 103
>26672_cfa-mir-98:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 22 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataact 81
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
Query: 82 atacaacttactactttccc 101
||||||||||||||||||||
Sbjct: 61 atacaacttactactttccc 80
>33955_ssc-mir-98:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 19 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagata 78
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 gggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagata 60
Query: 79 actatacaacttactacttt 98
||||||||||||||||||||
Sbjct: 61 actatacaacttactacttt 80
>27500_age-mir-98:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataac 80
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 81 tatacaacttactactttcc 100
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>27701_mml-mir-98:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataac 80
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 81 tatacaacttactactttcc 100
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>28291_ggo-mir-98:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataac 80
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 81 tatacaacttactactttcc 100
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>30078_ppa-mir-98:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataac 80
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 81 tatacaacttactactttcc 100
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>30801_ppy-mir-98:mirbase
Length = 80
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataac 80
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 1 gtgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataac 60
Query: 81 tatacaacttactactttcc 100
||||||||||||||||||||
Sbjct: 61 tatacaacttactactttcc 80
>31469_oan-mir-98:mirbase
Length = 149
Score = 97.6 bits (49), Expect = 2e-21
Identities = 83/92 (90%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 12 catgctggggtgaggtagtaagttgtattgttgtggggtagggatt--ttaggccccaat 69
||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 21 catgctgggatgaggtagtaagttgtattgttgtggggtagggatttcttttgccccaat 80
Query: 70 ttgaagataactatacaacttactactttccc 101
| | ||||||||||||| |||||||||||||
Sbjct: 81 tag-cgataactatacaatttactactttccc 111
>25753_xtr-mir-98:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 22 tgaggtagtaagttgtattgttgtgggg 49
||||||||||||||||||||||||||||
Sbjct: 17 tgaggtagtaagttgtattgttgtgggg 44
>27321_mdo-let-7b:mirbase
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 72/86 (83%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 18 ggggtgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagat 77
|||||||||||||| ||||| | ||| |||||| |||||| |||||||| ||||||
Sbjct: 4 ggggtgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcagaagat 61
Query: 78 aactatacaacttactactttccctg 103
||||||||||| |||| | |||||||
Sbjct: 62 aactatacaacctactgccttccctg 87
>26934_eca-let-7f:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 5 gtgaggtagtagattgtatagttgtggggtagtgatttta 44
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 gtgaggtagtagattgtatagttgtggggtagtgatttta 46
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 gtgaggtagtagattgtatagttgtggggtagtgatttta 46
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 87 gtgaggtagtagattgtatagttgtggggtagtgatttta 48
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 gtgaggtagtagattgtatagttgtggggtagtgatttta 45
>34680_tni-let-7h:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 14 tgctggggtgaggtagtaagttgtattgttgt 45
||||| |||||||||||||||||| |||||||
Sbjct: 10 tgctgtggtgaggtagtaagttgtgttgttgt 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 agataactatacaacttact 93
||||||||||||||||||||
Sbjct: 72 agataactatacaacttact 91
>26610_cfa-let-7f:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tgaggtagtaagttgtattgttgtggggtagggatttta 60
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 1 tgaggtagtagattgtatagttgtggggtagtgatttta 39
>34181_dre-let-7h:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ggtgaggtagtaagttgtattgttgt 45
|||||||||||||||||| |||||||
Sbjct: 17 ggtgaggtagtaagttgtgttgttgt 42
>34532_fru-let-7h:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ggtgaggtagtaagttgtattgttgt 45
|||||||||||||||||| |||||||
Sbjct: 4 ggtgaggtagtaagttgtgttgttgt 29
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 agataactatacaacttact 93
||||||||||||||||||||
Sbjct: 57 agataactatacaacttact 76
>25680_xtr-let-7e-2:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 17 tggggtgaggtagtaagttgtattgttgtggg 48
||||||||||||||| ||||| | ||||||||
Sbjct: 7 tggggtgaggtagtaggttgtttagttgtggg 38
>27632_mml-let-7b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 72 gaagataactatacaacttactactttccctg 103
||||||||||||||||| |||| | |||||||
Sbjct: 52 gaagataactatacaacctactgccttccctg 83
>28342_hsa-let-7b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 72 gaagataactatacaacttactactttccctg 103
||||||||||||||||| |||| | |||||||
Sbjct: 52 gaagataactatacaacctactgccttccctg 83
>30129_ptr-let-7b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 72 gaagataactatacaacttactactttccctg 103
||||||||||||||||| |||| | |||||||
Sbjct: 51 gaagataactatacaacctactgccttccctg 82
>30734_ppy-let-7b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 72 gaagataactatacaacttactactttccctg 103
||||||||||||||||| |||| | |||||||
Sbjct: 52 gaagataactatacaacctactgccttccctg 83
>31754_mmu-let-7b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 72 gaagataactatacaacttactactttccctg 103
||||||||||||||||| |||| | |||||||
Sbjct: 53 gaagataactatacaacctactgccttccctg 84
>31756_mmu-let-7c-2:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 17 tggggtgaggtagtaagttgtattgttgtggg 48
||||||||||||||| ||||||| ||| ||||
Sbjct: 9 tggggtgaggtagtaggttgtatggttttggg 40
>32640_rno-let-7b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 72 gaagataactatacaacttactactttccctg 103
||||||||||||||||| |||| | |||||||
Sbjct: 53 gaagataactatacaacctactgccttccctg 84
>32642_rno-let-7c-2:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 17 tggggtgaggtagtaagttgtattgttgtggg 48
||||||||||||||| ||||||| ||| ||||
Sbjct: 9 tggggtgaggtagtaggttgtatggttttggg 40
>34167_dre-let-7a-3:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 agataactatacaacttact 93
||||||||||||||||||||
Sbjct: 62 agataactatacaacttact 81
>34178_dre-let-7f:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 21 gtgaggtagtaagttgtattgttgtggggtagggatttta 60
||||||||||| |||||| ||||| |||||| |||||||
Sbjct: 19 gtgaggtagtagattgtatagttgtagggtagtgatttta 58
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 agataactatacaacttact 93
||||||||||||||||||||
Sbjct: 48 agataactatacaacttact 67
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 74 agataactatacaacttact 93
||||||||||||||||||||
Sbjct: 56 agataactatacaacttact 75
