miRNEST 2.0, an integrative microRNA resource :: BLAST
>27117_eca-mir-302c:mirbase
Length = 68
Score = 127 bits (64), Expect = 1e-30
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 5 tgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttcagtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttcagtg 64
Query: 65 gagg 68
||||
Sbjct: 65 gagg 68
>26792_cfa-mir-302c:mirbase
Length = 68
Score = 119 bits (60), Expect = 2e-28
Identities = 63/64 (98%)
Strand = Plus / Plus
Query: 5 tgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttcagtg 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 tgctttaacatgggggtacctgctgtgtaaaacaaaagtaagtgcttccatgtttcagtg 64
Query: 65 gagg 68
||||
Sbjct: 65 gagg 68
>27833_mml-mir-302c:mirbase
Length = 68
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 5 tgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttcagtg 64
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 5 tgctttaacatgggggtacctgctgtgtgaaacaaaagtaagtgcttccatgtttcagtg 64
Query: 65 gagg 68
||||
Sbjct: 65 gagg 68
>28557_hsa-mir-302c:mirbase
Length = 68
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 5 tgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttcagtg 64
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 5 tgctttaacatgggggtacctgctgtgtgaaacaaaagtaagtgcttccatgtttcagtg 64
Query: 65 gagg 68
||||
Sbjct: 65 gagg 68
>30929_ppy-mir-302c:mirbase
Length = 68
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 5 tgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttcagtg 64
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 5 tgctttaacatgggggtacctgctgtgtgaaacaaaagtaagtgcttccatgtttcagtg 64
Query: 65 gagg 68
||||
Sbjct: 65 gagg 68
>30312_ptr-mir-302c:mirbase
Length = 67
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 5 tgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttcagtg 64
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 5 tgctttaacatgggggtacctgctgtgtgaaacaaaagtaagtgcttccatgtttcagtg 64
Query: 65 gag 67
|||
Sbjct: 65 gag 67
>31984_mmu-mir-302c:mirbase
Length = 68
Score = 97.6 bits (49), Expect = 9e-22
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1 cctctgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttc 60
||||||||||||||||||| |||||||||||| || |||||| |||||||||||||||||
Sbjct: 1 cctctgctttaacatggggttacctgctgtgttaaacaaaagcaagtgcttccatgtttc 60
Query: 61 agtgg 65
|||||
Sbjct: 61 agtgg 65
>27440_mdo-mir-302c:mirbase
Length = 59
Score = 71.9 bits (36), Expect = 5e-14
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 6 gctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttcagtgg 65
||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 1 gctttaacatgggggtacctgctacgtaata-aaaagtaagtgcttccatgtttcagtgg 59
>26019_gga-mir-302c:mirbase
Length = 65
Score = 69.9 bits (35), Expect = 2e-13
Identities = 58/65 (89%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 1 cctctgctttaacatgggggtacctgctgtgtaaagcaaaagtaagtgcttccatgtttc 60
|||| |||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct: 1 cctccgctttaacatggaggtacctgctgccta---caaaagtaagtgcttccatgtttc 57
Query: 61 agtgg 65
|||||
Sbjct: 58 agtgg 62
>26018_gga-mir-302b:mirbase
Length = 72
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 37 caaaagtaagtgcttccatgtttcagtggagg 68
||||||||||||||||||||||| ||| ||||
Sbjct: 40 caaaagtaagtgcttccatgttttagtagagg 71
>26790_cfa-mir-302a:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
|||||||||||||||||||||| ||||
Sbjct: 39 aaaagtaagtgcttccatgttttagtg 65
>27115_eca-mir-302a:mirbase
Length = 68
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
|||||||||||||||||||||| ||||
Sbjct: 39 aaaagtaagtgcttccatgttttagtg 65
>27438_mdo-mir-302a:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
|||||||||||||||||||||| ||||
Sbjct: 40 aaaagtaagtgcttccatgttttagtg 66
>31547_oan-mir-302-2:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtggagg 68
|||||||||||||||||||||| ||| ||||
Sbjct: 37 aaaagtaagtgcttccatgttttagtagagg 67
>33310_bta-mir-302a:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
|||||||||||||||||||||| ||||
Sbjct: 40 aaaagtaagtgcttccatgttttagtg 66
>26020_gga-mir-302d:mirbase
Length = 69
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgttt 59
||||||||||||||||||||||
Sbjct: 39 aaaagtaagtgcttccatgttt 60
>28556_hsa-mir-302b:mirbase
Length = 73
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgttt 59
||||||||||||||||||||||
Sbjct: 42 aaaagtaagtgcttccatgttt 63
>30311_ptr-mir-302b:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgttt 59
||||||||||||||||||||||
Sbjct: 42 aaaagtaagtgcttccatgttt 63
>31546_oan-mir-302-1:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 39 aaagtaagtgcttccatgtttcagtg 64
||||||||||||||||||||| ||||
Sbjct: 74 aaagtaagtgcttccatgttttagtg 99
>27834_mml-mir-302d:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 5e-05
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 cctctgctttaacatgggggtacctgctgtgtaaag-caaaagtaagtgcttccatgttt 59
||||| ||||||||||| || || ||||||| | | ||||| |||||||||||||||||
Sbjct: 1 cctctactttaacatggaggcacttgctgtggtatgacaaaaataagtgcttccatgttt 60
Query: 60 cagtg 64
||||
Sbjct: 61 gagtg 65
>28558_hsa-mir-302d:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 5e-05
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 cctctgctttaacatgggggtacctgctgtgtaaag-caaaagtaagtgcttccatgttt 59
||||| ||||||||||| || || ||||||| | | ||||| |||||||||||||||||
Sbjct: 1 cctctactttaacatggaggcacttgctgtgacatgacaaaaataagtgcttccatgttt 60
Query: 60 cagtg 64
||||
Sbjct: 61 gagtg 65
>30313_ptr-mir-302d:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 5e-05
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 1 cctctgctttaacatgggggtacctgctgtgtaaag-caaaagtaagtgcttccatgttt 59
||||| ||||||||||| || || ||||||| | | ||||| |||||||||||||||||
Sbjct: 1 cctctactttaacatggaggcacttgctgtgacatgacaaaaataagtgcttccatgttt 60
Query: 60 cagtg 64
||||
Sbjct: 61 gagtg 65
>31982_mmu-mir-302a:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 aaagtaagtgcttccatgttt 59
|||||||||||||||||||||
Sbjct: 40 aaagtaagtgcttccatgttt 60
>27831_mml-mir-302a:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 aagtaagtgcttccatgttt 59
||||||||||||||||||||
Sbjct: 41 aagtaagtgcttccatgttt 60
>27832_mml-mir-302b:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 aagtaagtgcttccatgttt 59
||||||||||||||||||||
Sbjct: 47 aagtaagtgcttccatgttt 66
>28555_hsa-mir-302a:mirbase
Length = 69
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 aagtaagtgcttccatgttt 59
||||||||||||||||||||
Sbjct: 41 aagtaagtgcttccatgttt 60
>30310_ptr-mir-302a:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 aagtaagtgcttccatgttt 59
||||||||||||||||||||
Sbjct: 41 aagtaagtgcttccatgttt 60
>30928_ppy-mir-302b:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 40 aagtaagtgcttccatgttt 59
||||||||||||||||||||
Sbjct: 47 aagtaagtgcttccatgttt 66
>30930_ppy-mir-302d:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 37 caaaagtaagtgcttccatgtttcagtg 64
||||| ||||||||||||||||| ||||
Sbjct: 38 caaaaataagtgcttccatgtttgagtg 65
>26017_gga-mir-302a:mirbase
Length = 67
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
||||| |||||||||||||||| ||||
Sbjct: 37 aaaagaaagtgcttccatgttttagtg 63
>26791_cfa-mir-302b:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 41 agtaagtgcttccatgttt 59
|||||||||||||||||||
Sbjct: 47 agtaagtgcttccatgttt 65
>26793_cfa-mir-302d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
|||| ||||||||||||||||| ||||
Sbjct: 39 aaaaataagtgcttccatgttttagtg 65
>27116_eca-mir-302b:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 41 agtaagtgcttccatgttt 59
|||||||||||||||||||
Sbjct: 48 agtaagtgcttccatgttt 66
>27118_eca-mir-302d:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
|||| ||||||||||||||||| ||||
Sbjct: 39 aaaaataagtgcttccatgttttagtg 65
>31983_mmu-mir-302b:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 41 agtaagtgcttccatgttt 59
|||||||||||||||||||
Sbjct: 46 agtaagtgcttccatgttt 64
>31985_mmu-mir-302d:mirbase
Length = 66
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
|||| ||||||||||||||||| ||||
Sbjct: 37 aaaaataagtgcttccatgtttgagtg 63
>33311_bta-mir-302b:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 41 agtaagtgcttccatgttt 59
|||||||||||||||||||
Sbjct: 47 agtaagtgcttccatgttt 65
>33313_bta-mir-302d:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 38 aaaagtaagtgcttccatgtttcagtg 64
|||| ||||||||||||||||| ||||
Sbjct: 41 aaaaataagtgcttccatgttttagtg 67
