miRNEST 2.0, an integrative microRNA resource :: BLAST
>40108_ath-MIR408:mirbase
Length = 218
Score = 214 bits (108), Expect = 1e-56
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 1 atgagagagagacagggaacaagcagagcatggattgagtttactaaaacattaaacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atgagagagagacagggaacaagcagagcatggattgagtttactaaaacattaaacgac 101
Query: 61 tctgttttgtctctacccatgcactgcctcttccctggctccctcttt 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tctgttttgtctctacccatgcactgcctcttccctggctccctcttt 149
>39897_aly-MIR408:mirbase
Length = 211
Score = 208 bits (105), Expect = 6e-55
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 4 agagagagacagggaacaagcagagcatggattgagtttactaaaacattaaacgactct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 agagagagacagggaacaagcagagcatggattgagtttactaaaacattaaacgactct 101
Query: 64 gttttgtctctacccatgcactgcctcttccctggctccctcttt 108
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gttttgtctctacccatgcactgcctcttccctggctccctcttt 146
>41463_ptc-MIR408:mirbase
Length = 105
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 63 tgttttgtctctacccatgcactgcctcttccctggct 100
||||||| ||||||||||||||||||||||||||||||
Sbjct: 60 tgttttggctctacccatgcactgcctcttccctggct 97
>41683_vvi-MIR408:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 62 ctgttttgtctctacccatgcactgcctcttccctggctc 101
||||||| |||||||||||||||||||||||||||||||
Sbjct: 60 ctgtttttgctctacccatgcactgcctcttccctggctc 99
>40391_rco-MIR408:mirbase
Length = 92
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 61 tctgttttgtctctacccatgcactgcctcttccctggct 100
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 49 tctgttttggctctacccctgcactgcctcttccctggct 88
>41252_csi-MIR408:mirbase
Length = 153
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 60 ctctgttttgtctctacccatgcactgcctcttccctggctc 101
|||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 101 ctctgttttggctcctcccatgcactgcctcttccctggctc 142
>40405_ahy-MIR408:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 catgcactgcctcttccctggctccctcttt 108
|||||||||||||||||||||||| ||||||
Sbjct: 80 catgcactgcctcttccctggctctctcttt 110
>40404_ahy-MIR408:mirbase
Length = 122
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 catgcactgcctcttccctggctccctcttt 108
|||||||||||||||||||||||| ||||||
Sbjct: 80 catgcactgcctcttccctggctctctcttt 110
>42465_sof-MIR408d:mirbase
Length = 215
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 75 acccatgcactgcctcttccctggctccc 103
|||| ||||||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggctccc 200
>42647_tae-MIR408:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctccc 103
||||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctccc 160
>42464_sof-MIR408c:mirbase
Length = 286
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctccc 103
||||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctccc 271
>42463_sof-MIR408b:mirbase
Length = 286
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctccc 103
||||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctccc 271
>42462_sof-MIR408a:mirbase
Length = 283
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctccc 103
||||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctccc 268
>42052_osa-MIR408:mirbase
Length = 213
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctccc 103
||||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctccc 177
>41193_aqc-MIR408:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 77 ccatgcactgcctcttccctggct 100
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>42829_zma-MIR408:mirbase
Length = 191
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctcc 102
|||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctcc 175
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 acccatgcactgcctcttccctggctc 101
|||| ||||||||||||||||||||||
Sbjct: 154 acccctgcactgcctcttccctggctc 180
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 catgcactgcctcttccctggct 100
|||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggct 114
>39428_pta-MIR408:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 atgcactgcctcttccctggctc 101
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>42830_zma-MIR408b:mirbase
Length = 147
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctc 101
||||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggctc 147
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctc 101
||||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggctc 248
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 atgcactgcctcttccctggct 100
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggct 100
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>42466_sof-MIR408e:mirbase
Length = 283
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggctccc 103
||||||| ||||||||||||||||
Sbjct: 245 tgcactgactcttccctggctccc 268
