miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31337_ppy-mir-1282:mirbase
Length = 101
Score = 200 bits (101), Expect = 1e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctccgagtccctaggggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctccgagtccctaggggtag 60
Query: 61 agatgatggggcactgggaggtaccagagggcaaaaaggac 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatgatggggcactgggaggtaccagagggcaaaaaggac 101
>27293_eca-mir-1282:mirbase
Length = 101
Score = 192 bits (97), Expect = 3e-50
Identities = 100/101 (99%)
Strand = Plus / Plus
Query: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctccgagtccctaggggtag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctccgagtccctgggggtag 60
Query: 61 agatgatggggcactgggaggtaccagagggcaaaaaggac 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatgatggggcactgggaggtaccagagggcaaaaaggac 101
>29137_hsa-mir-1282:mirbase
Length = 101
Score = 192 bits (97), Expect = 3e-50
Identities = 100/101 (99%)
Strand = Plus / Plus
Query: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctccgagtccctaggggtag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctccgagtccctgggggtag 60
Query: 61 agatgatggggcactgggaggtaccagagggcaaaaaggac 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatgatggggcactgggaggtaccagagggcaaaaaggac 101
>30694_ptr-mir-1282-1:mirbase
Length = 100
Score = 190 bits (96), Expect = 1e-49
Identities = 99/100 (99%)
Strand = Plus / Plus
Query: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctccgagtccctaggggtag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctccgagtccctgggggtag 60
Query: 61 agatgatggggcactgggaggtaccagagggcaaaaagga 100
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatgatggggcactgggaggtaccagagggcaaaaagga 100
>30695_ptr-mir-1282-2:mirbase
Length = 101
Score = 141 bits (71), Expect = 1e-34
Identities = 93/99 (93%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctcc-gagtccctaggggta 59
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 1 ccttcttctcgtttgcctttttctgcttctgctgcatgatctcctgagtccctgggggta 60
Query: 60 gagatgatggggcactgggaggtaccagagggcaaaaag 98
|||||| | ||||||| ||||||| ||||||||||||||
Sbjct: 61 gagatggtagggcactaggaggtatcagagggcaaaaag 99
