miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00871;mir-689;ABRP01348725.1/1139-1240 132908:Pteropus vampyrus
(large flying fox)
Length = 102
Score = 79.8 bits (40), Expect = 4e-15
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccg 69
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcgggccg 40
>RF00871;mir-689;ABRN01061137.1/1035-1140 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 106
Score = 79.8 bits (40), Expect = 4e-15
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccg 69
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcgggccg 40
>RF00871;mir-689;ABRN01342492.1/22779-22885 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 107
Score = 77.8 bits (39), Expect = 2e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggcc 68
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcgggcc 39
>RF00871;mir-689;ABRQ01788070.1/721-824 9813:Procavia capensis
(cape rock hyrax)
Length = 104
Score = 77.8 bits (39), Expect = 2e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggcc 68
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcgggcc 39
>RF00871;mir-689;AAQQ01417943.1/173-75 43179:Spermophilus
tridecemlineatus (thirteen-lined ground squirrel)
Length = 99
Score = 75.8 bits (38), Expect = 6e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 32 cggatagccggtcccccgccgtccccgccggcgggccg 69
||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cggatagccggtcccccgccgtccccgccggcgggccg 40
>RF00871;mir-689;AAPY01395355.1/323-425 37347:Tupaia belangeri
(northern tree shrew)
Length = 103
Score = 73.8 bits (37), Expect = 2e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccgt 70
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ctcggatagccggtccccccccgtccccgccggcgggccgt 41
>RF00871;mir-689;AAYZ01378573.1/1169-1278 9978:Ochotona princeps
(American pika)
Length = 110
Score = 71.9 bits (36), Expect = 1e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgg 65
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcgg 36
>RF00871;mir-689;AAGW01199138.1/1508-1580 9986:Oryctolagus
cuniculus (rabbit)
Length = 73
Score = 71.9 bits (36), Expect = 1e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgg 65
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcgg 36
>RF00871;mir-689;AAGW01137894.1/1949-2057 9986:Oryctolagus
cuniculus (rabbit)
Length = 109
Score = 71.9 bits (36), Expect = 1e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgg 65
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcgg 36
>RF00871;mir-689;ABRR01542847.1/915-1024 30538:Lama pacos (alpaca)
Length = 110
Score = 69.9 bits (35), Expect = 4e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcg 64
|||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcg 35
>RF00871;mir-689;ABRR01681657.1/683-803 30538:Lama pacos (alpaca)
Length = 121
Score = 69.9 bits (35), Expect = 4e-12
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcg 64
|||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggcg 35
>RF00871;mir-689;AALT01032682.1/710-801 42254:Sorex araneus
(European shrew)
Length = 92
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 36 tagccggtcccccgccgtccccgccggcgggccg 69
||||||||||||||||||||||||||||||||||
Sbjct: 7 tagccggtcccccgccgtccccgccggcgggccg 40
>RF00871;mir-689;AAPE01336642.1/781-881 59463:Myotis lucifugus
(little brown bat)
Length = 101
Score = 67.9 bits (34), Expect = 2e-11
Identities = 41/42 (97%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgc-cgtccccgccggcgggccgt 70
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgctcgtccccgccggcgggccgt 42
>RF00871;mir-689;AAPE01569920.1/537-638 59463:Myotis lucifugus
(little brown bat)
Length = 102
Score = 67.9 bits (34), Expect = 2e-11
Identities = 41/42 (97%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgc-cgtccccgccggcgggccgt 70
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgctcgtccccgccggcgggccgt 42
>RF00871;mir-689;CABD01786770.1/348-456 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 109
Score = 67.9 bits (34), Expect = 2e-11
Identities = 41/42 (97%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccgt 70
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgccggcgggccgt 42
>RF00871;mir-689;CABD01744586.1/395-503 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 109
Score = 67.9 bits (34), Expect = 2e-11
Identities = 41/42 (97%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccgt 70
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgccggcgggccgt 42
>RF00871;mir-689;AAGW01111593.1/1450-1548 9986:Oryctolagus
cuniculus (rabbit)
Length = 99
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggc 63
||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgccggc 34
>RF00871;mir-689;AAGV020782253.1/1624-1555 9361:Dasypus
novemcinctus (nine-banded armadillo)
Length = 70
Score = 65.9 bits (33), Expect = 6e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccgt 70
|||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1 ctcggatagccggtccccagccgtccccgccggcaggccgt 41
>RF00871;mir-689;AAEX02018488.1/51455-51540 9615:Canis lupus
familiaris (dog)
Length = 86
Score = 65.9 bits (33), Expect = 6e-11
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 33 ggatagccggtcccccgccgtccccgccggcgggccg 69
|||||||||||||||||||||||| ||||||||||||
Sbjct: 4 ggatagccggtcccccgccgtccctgccggcgggccg 40
>RF00871;mir-689;AADA01187662.1/634-513 9598:Pan troglodytes
(chimpanzee)
Length = 122
Score = 65.9 bits (33), Expect = 6e-11
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccg 69
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgccggcgggccg 41
>RF00871;mir-689;AADA01173172.1/928-809 9598:Pan troglodytes
(chimpanzee)
Length = 120
Score = 65.9 bits (33), Expect = 6e-11
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccg 69
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgccggcgggccg 41
>RF00871;mir-689;M27830.1/279-393 9606:Homo sapiens (human)
Length = 115
Score = 65.9 bits (33), Expect = 6e-11
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccg 69
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgccggcgggccg 41
>RF00871;mir-689;AB171103.1/675-770 9541:Macaca fascicularis
(crab-eating macaque)
Length = 96
Score = 65.9 bits (33), Expect = 6e-11
Identities = 40/41 (97%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccg 69
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgccggcgggccg 41
>RF00871;mir-689;ABVD01462306.1/2647-2745 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 99
Score = 63.9 bits (32), Expect = 2e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccg 69
||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ctcggatagccgggtccccgccgtccccgccggcgggccg 40
>RF00871;mir-689;AAWR02000389.1/2616-2509 9796:Equus caballus
(horse)
Length = 108
Score = 63.9 bits (32), Expect = 2e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccg 69
||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 ctcggatagccgggtccccgccgtccccgccggcgggccg 40
>RF00871;mir-689;ABRP01362083.1/893-994 132908:Pteropus vampyrus
(large flying fox)
Length = 102
Score = 63.9 bits (32), Expect = 2e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 34 gatagccggtcccccgccgtccccgccggcgggccg 69
|||||||||||||||| |||||||||||||||||||
Sbjct: 5 gatagccggtcccccgtcgtccccgccggcgggccg 40
>RF00871;mir-689;ABRN01133326.1/19980-19874 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 107
Score = 63.9 bits (32), Expect = 2e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccg 69
|||||||||||||| |||||||||||||||||| ||||||
Sbjct: 1 ctcggatagccggttccccgccgtccccgccggtgggccg 40
>RF00871;mir-689;ABRN01081710.1/627-521 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 107
Score = 61.9 bits (31), Expect = 9e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 31 tcggatagccggtcccccgccgtccccgccggcgggccg 69
||||||||||||||||||||||||||| ||||||||||
Sbjct: 2 tcggatagccggtcccccgccgtccccaacggcgggccg 40
>RF00871;mir-689;AAEX02034506.1/136858-136944 9615:Canis lupus
familiaris (dog)
Length = 87
Score = 61.9 bits (31), Expect = 9e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 31 tcggatagccggtcccccgccgtccccgccggcgggccg 69
|||||||||||||||||||||||||| || |||||||||
Sbjct: 2 tcggatagccggtcccccgccgtcccggctggcgggccg 40
>RF00871;mir-689;AAGW01013422.1/589-481 9986:Oryctolagus cuniculus
(rabbit)
Length = 109
Score = 61.9 bits (31), Expect = 9e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgcc 60
|||||||||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgccgtccccgcc 31
>RF00871;mir-689;AAGU02956073.1/800-917 9785:Loxodonta africana
(African savanna elephant)
Length = 118
Score = 61.9 bits (31), Expect = 9e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggcc 68
||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggcgccccgccgtccccgccggcgggcc 39
>RF00871;mir-689;AAGU02891490.1/380-493 9785:Loxodonta africana
(African savanna elephant)
Length = 114
Score = 61.9 bits (31), Expect = 9e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggcc 68
||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ctcggatagccggcgccccgccgtccccgccggcgggcc 39
>RF00871;mir-689;AALT01129889.1/800-891 42254:Sorex araneus
(European shrew)
Length = 92
Score = 60.0 bits (30), Expect = 4e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 36 tagccggtcccccgccgtccccgccggcgggccg 69
||||||||||||||||||||||||||||| ||||
Sbjct: 7 tagccggtcccccgccgtccccgccggcgagccg 40
>RF00871;mir-689;AAPY01417682.1/1368-1468 37347:Tupaia belangeri
(northern tree shrew)
Length = 101
Score = 58.0 bits (29), Expect = 1e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccgt 70
||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 1 ctcggatagccagtcccc-gccgtccccgccggcgggccgt 40
>RF00871;mir-689;AJ334227.1/165-48 9606:Homo sapiens (human)
Length = 118
Score = 58.0 bits (29), Expect = 1e-08
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccg 69
|||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1 ctcggatagccggtccaccgcctgtccccgccggcgggccg 41
>RF00871;mir-689;S78388.1/59-169 9606:Homo sapiens (human)
Length = 111
Score = 58.0 bits (29), Expect = 1e-08
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgg 65
|||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgccggcgg 37
>RF00871;mir-689;AAYZ01701850.1/704-813 9978:Ochotona princeps
(American pika)
Length = 110
Score = 58.0 bits (29), Expect = 1e-08
Identities = 36/37 (97%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccc-cgccgtccccgccggcgg 65
|||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ctcggatagccggtccccccgccgtccccgccggcgg 37
>RF00871;mir-689;ABRN01255114.1/42034-42140 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 107
Score = 56.0 bits (28), Expect = 6e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgggccg 69
|||||||||||||| ||||||||||||| |||| ||||||
Sbjct: 1 ctcggatagccggttccccgccgtccccaccggtgggccg 40
>RF00871;mir-689;AAKN02059111.1/1843-1730 10141:Cavia porcellus
(domestic guinea pig)
Length = 114
Score = 56.0 bits (28), Expect = 6e-08
Identities = 35/36 (97%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgc-cgtccccgccggcg 64
||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ctcggatagccggtcccccgctcgtccccgccggcg 36
>RF00871;mir-689;AAGW01300366.1/2058-2165 9986:Oryctolagus
cuniculus (rabbit)
Length = 108
Score = 56.0 bits (28), Expect = 6e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggcgg 65
|||||||||||||||||| |||||||||||| ||||
Sbjct: 1 ctcggatagccggtccccagccgtccccgccagcgg 36
>RF00871;mir-689;ABDC01596675.1/52-166 30608:Microcebus murinus
(gray mouse lemur)
Length = 115
Score = 54.0 bits (27), Expect = 2e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggc 63
|||||||||||||||||||||| ||||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgccggc 35
>RF00871;mir-689;AADA01180633.1/142-30 9598:Pan troglodytes
(chimpanzee)
Length = 113
Score = 54.0 bits (27), Expect = 2e-07
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggc 67
|||||||||||||||||||||| |||||||| |||||||
Sbjct: 1 ctcggatagccggtcccccgcctgtccccgcgggcgggc 39
>RF00871;mir-689;ABRO01001549.1/136-25 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 112
Score = 54.0 bits (27), Expect = 2e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgc-cgtccccgccggc 63
||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctcggatagccggtcccccgctcgtccccgccggc 35
>RF00871;mir-689;ABRO01001534.1/878-774 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 105
Score = 54.0 bits (27), Expect = 2e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgc-cgtccccgccggc 63
||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctcggatagccggtcccccgctcgtccccgccggc 35
>RF00871;mir-689;ABRO01001557.1/1081-969 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 113
Score = 54.0 bits (27), Expect = 2e-07
Identities = 34/35 (97%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgc-cgtccccgccggc 63
||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctcggatagccggtcccccgctcgtccccgccggc 35
>RF00871;mir-689;AAFC03051163.1/24893-24999 9913:Bos taurus
(cattle)
Length = 107
Score = 52.0 bits (26), Expect = 9e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 33 ggatagccggtcccccgccgtccccgccggcggg 66
|||||||||||||||||| ||||||| |||||||
Sbjct: 4 ggatagccggtcccccgcggtccccggcggcggg 37
>RF00871;mir-689;AAYZ01660151.1/1058-1168 9978:Ochotona princeps
(American pika)
Length = 111
Score = 52.0 bits (26), Expect = 9e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgc 59
||||||||||||||||| ||||||||||||
Sbjct: 1 ctcggatagccggtcccgcgccgtccccgc 30
>RF00871;mir-689;AAIY01808979.1/670-548 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 123
Score = 52.0 bits (26), Expect = 9e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggc 63
||||||||||||| |||||||||||||||||||
Sbjct: 1 ctcggatagccggcgccccgccgtccccgccggc 34
>RF00871;mir-689;AAIY01624836.1/203-108 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 96
Score = 52.0 bits (26), Expect = 9e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggc 63
||||||||||||| |||||||||||||||||||
Sbjct: 1 ctcggatagccggcgccccgccgtccccgccggc 34
>RF00871;mir-689;AAIY01237292.1/2198-2316 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 119
Score = 52.0 bits (26), Expect = 9e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggc 63
||||||||||||| |||||||||||||||||||
Sbjct: 1 ctcggatagccggcgccccgccgtccccgccggc 34
>RF00871;mir-689;ABVD01824659.1/599-703 9358:Choloepus hoffmanni
(Hoffmann's two-fingered sloth)
Length = 105
Score = 50.1 bits (25), Expect = 4e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgt-ccccgccggcgggccg 69
||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 1 ctcggatagccgggtccccgccgtcccccgccggcgggccg 41
>RF00871;mir-689;AJ330150.1/164-48 9606:Homo sapiens (human)
Length = 117
Score = 50.1 bits (25), Expect = 4e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccg 69
|||||||||||||||||||||| | |||| |||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgacccctccggcgggccg 41
>RF00871;mir-689;ABBA01251977.1/610-725 9606:Homo sapiens (human)
Length = 116
Score = 50.1 bits (25), Expect = 4e-06
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc-gtccccgccggcgggccg 69
|||||||||||||||||||||| || ||| |||||||||||
Sbjct: 1 ctcggatagccggtcccccgcctgttcccaccggcgggccg 41
>RF00871;mir-689;AAYZ01324609.1/134-233 9978:Ochotona princeps
(American pika)
Length = 100
Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 32 cggatagccggtcccccgccgtccc 56
|||||||||||||||||||||||||
Sbjct: 3 cggatagccggtcccccgccgtccc 27
>RF00871;mir-689;AAPE01311901.1/1464-1378 59463:Myotis lucifugus
(little brown bat)
Length = 87
Score = 48.1 bits (24), Expect = 1e-05
Identities = 39/43 (90%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgcc--gtccccgccggcgggccgt 70
||||||||||||||||||| | |||||||||||||||||||
Sbjct: 1 ctcggatagccggtccccccgctggtccccgccggcgggccgt 43
>RF00871;mir-689;AJ327378.1/163-48 9606:Homo sapiens (human)
Length = 116
Score = 48.1 bits (24), Expect = 1e-05
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 31 tcggatagccggtcccccgcc-gtccccgccggcgggccg 69
||||| ||| ||||||||||| ||||||||||||||||||
Sbjct: 2 tcggaaagctggtcccccgcctgtccccgccggcgggccg 41
>RF00871;mir-689;AAPE01569130.1/567-464 59463:Myotis lucifugus
(little brown bat)
Length = 104
Score = 46.1 bits (23), Expect = 6e-05
Identities = 40/43 (93%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgc-cgtccccgcc-ggcgggccgt 70
||||||||||||||||||||| ||||||| || ||||||||||
Sbjct: 1 ctcggatagccggtcccccgctcgtcccccccgggcgggccgt 43
>RF00871;mir-689;ABRT010296844.1/3386-3312 9478:Tarsius syrichta
(Philippine tarsier)
Length = 75
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 ctcggttggcctcggatagccggtccc 46
||||| |||||||||||||||||||||
Sbjct: 1 ctcggatggcctcggatagccggtccc 27
>RF00871;mir-689;AAGW01476742.1/1779-1880 9986:Oryctolagus
cuniculus (rabbit)
Length = 102
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 34 gatagccggtcccccgccgtccccgccggc 63
|||||| |||||||||| ||||||||||||
Sbjct: 5 gatagcgggtcccccgcggtccccgccggc 34
>RF00871;mir-689;AAIY01104421.1/1043-955 9371:Echinops telfairi
(small Madagascar hedgehog)
Length = 89
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 ctcggatagccggtcccccgccgtccccgccggc 63
||||||||||||| |||||| ||||||||||||
Sbjct: 1 ctcggatagccggcgccccgctgtccccgccggc 34
