miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33796_oar-mir-134:mirbase
Length = 108
Score = 214 bits (108), Expect = 1e-56
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 1 tggtgtcagcaccgttcagggtgtgtgactggttgaccagaggggcaagcactccgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtgtcagcaccgttcagggtgtgtgactggttgaccagaggggcaagcactccgttca 60
Query: 61 ccctctgggctgcctcgtcaccaactctcagcaccaaccgcacctgcc 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccctctgggctgcctcgtcaccaactctcagcaccaaccgcacctgcc 108
>26704_cfa-mir-134:mirbase
Length = 73
Score = 97.6 bits (49), Expect = 2e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcaagcactctgttcaccctgtgggccaccta 60
Query: 77 gtcaccaac 85
|||||||||
Sbjct: 61 gtcaccaac 69
>27028_eca-mir-134:mirbase
Length = 71
Score = 95.6 bits (48), Expect = 6e-21
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 18 agggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctcg 77
||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||| |
Sbjct: 1 agggtgtgtgactggttgaccagaggggcaagcactctgttcaccctgtgggccacctag 60
Query: 78 tcaccaac 85
||||||||
Sbjct: 61 tcaccaac 68
>33217_bta-mir-134:mirbase
Length = 73
Score = 89.7 bits (45), Expect = 4e-19
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
|||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||
Sbjct: 1 cagggtgtgtgactggttgaccagagtggccagcactcggttcaccctctgggccaccta 60
Query: 77 gtcaccaac 85
|||||||||
Sbjct: 61 gtcaccaac 69
>28213_mne-mir-134:mirbase
Length = 73
Score = 81.8 bits (41), Expect = 9e-17
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
Query: 77 gtcaccaac 85
|||||||||
Sbjct: 61 gtcaccaac 69
>28448_hsa-mir-134:mirbase
Length = 73
Score = 81.8 bits (41), Expect = 9e-17
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
Query: 77 gtcaccaac 85
|||||||||
Sbjct: 61 gtcaccaac 69
>30092_ppa-mir-134:mirbase
Length = 73
Score = 81.8 bits (41), Expect = 9e-17
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
Query: 77 gtcaccaac 85
|||||||||
Sbjct: 61 gtcaccaac 69
>30833_ppy-mir-134:mirbase
Length = 73
Score = 81.8 bits (41), Expect = 9e-17
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccaccta 60
Query: 77 gtcaccaac 85
|||||||||
Sbjct: 61 gtcaccaac 69
>28305_ggo-mir-134:mirbase
Length = 73
Score = 79.8 bits (40), Expect = 4e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 18 agggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctcg 77
|||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||| |
Sbjct: 2 agggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccacctag 61
Query: 78 tcaccaac 85
||||||||
Sbjct: 62 tcaccaac 69
>30223_ptr-mir-134:mirbase
Length = 72
Score = 79.8 bits (40), Expect = 4e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 18 agggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctcg 77
|||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||| |
Sbjct: 1 agggtgtgtgactggttgaccagaggggcatgcactgtgttcaccctgtgggccacctag 60
Query: 78 tcaccaac 85
||||||||
Sbjct: 61 tcaccaac 68
>31862_mmu-mir-134:mirbase
Length = 71
Score = 79.8 bits (40), Expect = 4e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 18 agggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctcg 77
||||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||| |
Sbjct: 1 agggtgtgtgactggttgaccagaggggcgtgcactctgttcaccctgtgggccacctag 60
Query: 78 tcaccaac 85
||||||||
Sbjct: 61 tcaccaac 68
>27734_mml-mir-134:mirbase
Length = 73
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
|||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcgtgcactgtgttcaccctgtgggccaccta 60
Query: 77 gtcaccaac 85
|||||||||
Sbjct: 61 gtcaccaac 69
>32736_rno-mir-134:mirbase
Length = 73
Score = 73.8 bits (37), Expect = 2e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 17 cagggtgtgtgactggttgaccagaggggcaagcactccgttcaccctctgggctgcctc 76
|||||||||||||||||||||||||||||| ||||| ||||||||| ||||| |||
Sbjct: 1 cagggtgtgtgactggttgaccagaggggcgtgcactttgttcaccctgtgggccaccta 60
Query: 77 gtcaccaac 85
|||||||||
Sbjct: 61 gtcaccaac 69
