miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33207_bta-mir-128-2:mirbase
Length = 84
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 gcagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gcagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaacc 63
Query: 61 ggtctctttccctactgtgt 80
||||||||||||||||||||
Sbjct: 64 ggtctctttccctactgtgt 83
>27016_eca-mir-128:mirbase
Length = 84
Score = 143 bits (72), Expect = 2e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 1 gcagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaacc 60
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 4 gcagtgggaaggggggccgatgcactgtacgagagtgagtagcaggtctcacagtgaacc 63
Query: 61 ggtctctttccctactgtgt 80
||||||||||||||||||||
Sbjct: 64 ggtctctttccctactgtgt 83
>27724_mml-mir-128b:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gcagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaacc 60
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 4 gcagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaacc 63
Query: 61 ggtctctttccctactgtgt 80
||||||||||||||||||||
Sbjct: 64 ggtctctttccctactgtgt 83
>28438_hsa-mir-128-2:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gcagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaacc 60
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 4 gcagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaacc 63
Query: 61 ggtctctttccctactgtgt 80
||||||||||||||||||||
Sbjct: 64 ggtctctttccctactgtgt 83
>30215_ptr-mir-128-2:mirbase
Length = 83
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gcagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaacc 60
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 3 gcagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaacc 62
Query: 61 ggtctctttccctactgtgt 80
||||||||||||||||||||
Sbjct: 63 ggtctctttccctactgtgt 82
>30824_ppy-mir-128-2:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gcagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaacc 60
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 4 gcagtgggaaggggggccgatacactgtacgagagtgagtagcaggtctcacagtgaacc 63
Query: 61 ggtctctttccctactgtgt 80
||||||||||||||||||||
Sbjct: 64 ggtctctttccctactgtgt 83
>32728_rno-mir-128-2:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gcagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaacc 60
|||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 gcagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaacc 63
Query: 61 ggtctctttccctactgtgt 80
||||||||||||||||||||
Sbjct: 64 ggtctctttccctactgtgt 83
>31851_mmu-mir-128-2:mirbase
Length = 76
Score = 127 bits (64), Expect = 1e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 2 cagtgggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccg 61
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 cagtgggaaggggggccgatgcactgtaagagagtgagtagcaggtctcacagtgaaccg 60
Query: 62 gtctctttccctactg 77
||||||||||||||||
Sbjct: 61 gtctctttccctactg 76
>27378_mdo-mir-128:mirbase
Length = 84
Score = 105 bits (53), Expect = 5e-24
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 7 ggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctc 66
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgttacactgtcagagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 67 tttccctactgtg 79
||||||| |||||
Sbjct: 70 tttccctgctgtg 82
>25946_gga-mir-128-2:mirbase
Length = 84
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 7 ggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctc 66
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 69
Query: 67 tttccctactgtgt 80
||| ||| ||||||
Sbjct: 70 ttttcctgctgtgt 83
>26457_tgu-mir-128-2:mirbase
Length = 110
Score = 91.7 bits (46), Expect = 7e-20
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 7 ggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctc 66
||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 25 ggaaggggggccgttacactgtaagagagtgagtagcaggtctcacagtgaaccggtctc 84
Query: 67 tttccctactgtgt 80
||| ||| ||||||
Sbjct: 85 ttttcctgctgtgt 98
>26695_cfa-mir-128-2:mirbase
Length = 58
Score = 91.7 bits (46), Expect = 7e-20
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 12 gggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctcttt 69
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggggccgatacactgtacgagagtgagtagcaggtctcacagtgaaccggtctcttt 58
>31483_oan-mir-128-2:mirbase
Length = 111
Score = 85.7 bits (43), Expect = 4e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 7 ggaaggggggccgaggcactgtccgagagtgagtagcaggtctcacagtgaaccggtctc 66
||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 23 ggaaggggggccgttacactgtaagagagtgagtaccaggtctcacagtgaaccggtctc 82
Query: 67 tttccctactg 77
|||||| ||||
Sbjct: 83 tttcccgactg 93
>25769_xtr-mir-128-2:mirbase
Length = 80
Score = 71.9 bits (36), Expect = 6e-14
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 31 gagagtgagtagcaggtctcacagtgaaccggtctctttccctactgt 78
|||||||||||| |||||||||||||||||||||||||| | ||||||
Sbjct: 33 gagagtgagtagtaggtctcacagtgaaccggtctcttttcttactgt 80
>25476_pma-mir-128-1:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 46 gtctcacagtgaaccggtctctttccct 73
||||||||||||||||||||||||||||
Sbjct: 53 gtctcacagtgaaccggtctctttccct 80
>25477_pma-mir-128-2:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctctttccct 73
|||||||||||||||||||||||||||
Sbjct: 54 tctcacagtgaaccggtctctttccct 80
>34592_fru-mir-128-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 45 ggtctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttt 64
>34739_tni-mir-128-2:mirbase
Length = 72
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 45 ggtctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||||
Sbjct: 40 ggtctcacagtgaaccggtctcttt 64
>31482_oan-mir-128-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 gtctcacagtgaaccggtctcttt 69
||||||||||||||||||||||||
Sbjct: 41 gtctcacagtgaaccggtctcttt 64
>34286_dre-mir-128-2:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 46 gtctcacagtgaaccggtctcttt 69
||||||||||||||||||||||||
Sbjct: 66 gtctcacagtgaaccggtctcttt 89
>25768_xtr-mir-128-1:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttt 71
>25945_gga-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>26456_tgu-mir-128-1:mirbase
Length = 71
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 39 tctcacagtgaaccggtctcttt 61
>26694_cfa-mir-128-1:mirbase
Length = 56
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 34 tctcacagtgaaccggtctcttt 56
>27017_eca-mir-128-2:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctcttt 64
>27510_age-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>27617_sla-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>27723_mml-mir-128a:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>28437_hsa-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30089_ppa-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30214_ptr-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>30823_ppy-mir-128:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>31850_mmu-mir-128-1:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 42 tctcacagtgaaccggtctcttt 64
>32727_rno-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>33206_bta-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>33975_ssc-mir-128-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 48 tctcacagtgaaccggtctcttt 70
>34285_dre-mir-128-1:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 58 tctcacagtgaaccggtctcttt 80
>34591_fru-mir-128-1:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 49 tctcacagtgaaccggtctcttt 71
>34738_tni-mir-128-1:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 47 tctcacagtgaaccggtctcttt 69
|||||||||||||||||||||||
Sbjct: 44 tctcacagtgaaccggtctcttt 66
