miRNEST 2.0, an integrative microRNA resource :: BLAST
>27783_mml-mir-192:mirbase
Length = 110
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctgccaa 73
Query: 61 ttccataggtcacaggtatg 80
||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatg 93
>28500_hsa-mir-192:mirbase
Length = 110
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctgccaa 73
Query: 61 ttccataggtcacaggtatg 80
||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatg 93
>30266_ptr-mir-192:mirbase
Length = 109
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctgccaa 73
Query: 61 ttccataggtcacaggtatg 80
||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatg 93
>30881_ppy-mir-192:mirbase
Length = 110
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtgctctcgtctcccctctggctgccaa 73
Query: 61 ttccataggtcacaggtatg 80
||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatg 93
>33260_bta-mir-192:mirbase
Length = 106
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 10 gcacagggctctgacctatgaattgacagccagtgctcttgtgtcccctctggctgccaa 69
Query: 61 ttccataggtcacaggtatg 80
||||||||||||||||||||
Sbjct: 70 ttccataggtcacaggtatg 89
>31909_mmu-mir-192:mirbase
Length = 89
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
|||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 4 gcacagggctctgacctatgaattgacagccagtactcttttctctcctctggctgccaa 63
Query: 61 ttccataggtcacaggtatg 80
||||||||||||||||||||
Sbjct: 64 ttccataggtcacaggtatg 83
>32778_rno-mir-192:mirbase
Length = 110
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
|||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct: 14 gcacagggctctgacctatgaattgacagccagtactctgatctcgcctctggctgccag 73
Query: 61 ttccataggtcacaggtatg 80
||||||||||||||||||||
Sbjct: 74 ttccataggtcacaggtatg 93
>26747_cfa-mir-192:mirbase
Length = 65
Score = 121 bits (61), Expect = 8e-29
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 11 ctgacctatgaattgacagccagtgctctcatctcccctctggctgccaattccataggt 70
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ctgacctatgaattgacagccagtgctctcatctctcctctggctgccaattccataggt 60
Query: 71 cacag 75
|||||
Sbjct: 61 cacag 65
>31521_oan-mir-192:mirbase
Length = 91
Score = 119 bits (60), Expect = 3e-28
Identities = 76/80 (95%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 gcacagggctctgacctatgaattgacagccagtgctctcatctcccctctggctgccaa 60
|||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 6 gcacagggctctgacctatgaattgacagccagttctctc-tgacccctctggctgccaa 64
Query: 61 ttccataggtcacaggtatg 80
||||||||||||||||||||
Sbjct: 65 ttccataggtcacaggtatg 84
>27073_eca-mir-192:mirbase
Length = 61
Score = 91.7 bits (46), Expect = 7e-20
Identities = 59/62 (95%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 11 ctgacctatgaattgacagccagtgctctcatctcccctctggctgccaattccataggt 70
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 1 ctgacctatgaattgacagccagtgctcttgtct-ccctctggctgccaattccataggt 59
Query: 71 ca 72
||
Sbjct: 60 ca 61
>25812_xtr-mir-192:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgacctatgaattgacagccagtg 35
||||||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagccagtg 39
>34340_dre-mir-192:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 tgacctatgaattgacagccagtg 35
||||||||||||||||||||||||
Sbjct: 17 tgacctatgaattgacagccagtg 40
>34619_fru-mir-192:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacctatgaattgacagccagt 34
|||||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagccagt 38
>34766_tni-mir-192:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 tgacctatgaattgacagccagt 34
|||||||||||||||||||||||
Sbjct: 11 tgacctatgaattgacagccagt 33
>25512_pma-mir-192:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 tgacctatgaattgacagcc 31
||||||||||||||||||||
Sbjct: 16 tgacctatgaattgacagcc 35
>31535_oan-mir-215:mirbase
Length = 118
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 tgacctatgaattgacagccagt 34
|||||||||||||||||| ||||
Sbjct: 31 tgacctatgaattgacagacagt 53
