miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>27094_eca-mir-208b:mirbase
          Length = 77

 Score =  151 bits (76), Expect = 9e-38
 Identities = 76/76 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 61

                          
Query: 61 gtttgtctgagggcag 76
          ||||||||||||||||
Sbjct: 62 gtttgtctgagggcag 77




>32799_rno-mir-208b:mirbase
          Length = 112

 Score =  151 bits (76), Expect = 9e-38
 Identities = 79/80 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 77

                              
Query: 61 gtttgtctgagggcagagtg 80
          |||||||||||||| |||||
Sbjct: 78 gtttgtctgagggctgagtg 97




>32800_rno-mir-208b:mirbase
          Length = 112

 Score =  151 bits (76), Expect = 9e-38
 Identities = 79/80 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 77

                              
Query: 61 gtttgtctgagggcagagtg 80
          |||||||||||||| |||||
Sbjct: 78 gtttgtctgagggctgagtg 97




>33286_bta-mir-208b:mirbase
          Length = 77

 Score =  151 bits (76), Expect = 9e-38
 Identities = 76/76 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 61

                          
Query: 61 gtttgtctgagggcag 76
          ||||||||||||||||
Sbjct: 62 gtttgtctgagggcag 77




>31936_mmu-mir-208b:mirbase
          Length = 77

 Score =  147 bits (74), Expect = 1e-36
 Identities = 74/74 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 61

                        
Query: 61 gtttgtctgagggc 74
          ||||||||||||||
Sbjct: 62 gtttgtctgagggc 75




>26769_cfa-mir-208b:mirbase
          Length = 74

 Score =  145 bits (73), Expect = 5e-36
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 61

                       
Query: 61 gtttgtctgaggg 73
          |||||||||||||
Sbjct: 62 gtttgtctgaggg 74




>27805_mml-mir-208b:mirbase
          Length = 77

 Score =  127 bits (64), Expect = 1e-30
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||
Sbjct: 2  ctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaag 61

                          
Query: 61 gtttgtctgagggcag 76
          ||||||||||||||||
Sbjct: 62 gtttgtctgagggcag 77




>28527_hsa-mir-208b:mirbase
          Length = 77

 Score =  127 bits (64), Expect = 1e-30
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||
Sbjct: 2  ctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaag 61

                          
Query: 61 gtttgtctgagggcag 76
          ||||||||||||||||
Sbjct: 62 gtttgtctgagggcag 77




>30904_ppy-mir-208b:mirbase
          Length = 77

 Score =  127 bits (64), Expect = 1e-30
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||
Sbjct: 2  ctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaag 61

                          
Query: 61 gtttgtctgagggcag 76
          ||||||||||||||||
Sbjct: 62 gtttgtctgagggcag 77




>30286_ptr-mir-208b:mirbase
          Length = 76

 Score =  125 bits (63), Expect = 5e-30
 Identities = 72/75 (96%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctctcagggaagctttttgctcgcgttatgtttctcatccgaatataagacgaacaaaag 60
          |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||
Sbjct: 2  ctctcagggaagctttttgctcgaattatgtttctgatccgaatataagacgaacaaaag 61

                         
Query: 61 gtttgtctgagggca 75
          |||||||||||||||
Sbjct: 62 gtttgtctgagggca 76