miRNEST 2.0, an integrative microRNA resource :: BLAST
>40091_ath-MIR398c:mirbase
Length = 115
Score = 228 bits (115), Expect = 8e-61
Identities = 115/115 (100%)
Strand = Plus / Plus
Query: 11 tggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctac 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctac 60
Query: 71 gtcattgttacagctctcgtttcatgtgttctcaggtcacccctgctgagctctt 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcattgttacagctctcgtttcatgtgttctcaggtcacccctgctgagctctt 115
>40090_ath-MIR398b:mirbase
Length = 116
Score = 190 bits (96), Expect = 2e-49
Identities = 112/116 (96%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 11 tggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctac 70
||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct: 1 tggatctcgacagggttgatatgagaacacacgagtaatcaacggctgtaatgacgctac 60
Query: 71 gtcattgttacagctctcg-tttcatgtgttctcaggtcacccctgctgagctctt 125
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcattgttacagctctcgttttcatgtgttctcaggtcacccctgctgagctctt 116
>39883_aly-MIR398c:mirbase
Length = 132
Score = 145 bits (73), Expect = 1e-35
Identities = 120/132 (90%), Gaps = 4/132 (3%)
Strand = Plus / Plus
Query: 6 ggtagtggatctcgacagggttgatatgagaacacacgagcaatcaacggctat-aacga 64
||||||||||||||||||||| || ||||||||| | ||||||||||||||| | || ||
Sbjct: 1 ggtagtggatctcgacagggtcgacatgagaacatatgagcaatcaacggctgtaaatga 60
Query: 65 cgctacgtcattgttacagctctc-gtttcatgtgtt--ctcaggtcacccctgctgagc 121
|||||||||||| ||||| ||||| |||||||||||| |||||||||||||||||||||
Sbjct: 61 cgctacgtcattattacatctctcggtttcatgtgttaactcaggtcacccctgctgagc 120
Query: 122 tctttctctacc 133
||||||||||||
Sbjct: 121 tctttctctacc 132
>39882_aly-MIR398b:mirbase
Length = 142
Score = 123 bits (62), Expect = 3e-29
Identities = 112/131 (85%), Gaps = 12/131 (9%)
Strand = Plus / Plus
Query: 4 aaggtagtggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacg 63
|||||||||||||||||||||||||||||||| ||||| | | ||||||||||| ||| |
Sbjct: 12 aaggtagtggatctcgacagggttgatatgaggacacatgtgtaatcaacggctgtaatg 71
Query: 64 acgctacgtcattgttacagctctcgtttcatgtgttctcaggtcacccctgctgagctc 123
|||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 72 acgccacgtcattgtta------------catgtgttctcaggtcacccctgctgagctc 119
Query: 124 tttctctaccg 134
|||||||||||
Sbjct: 120 tttctctaccg 130
>40729_mtr-MIR398b:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 92 tcatgtgttctcaggtcacccctgctga 119
||||||||||||||||| ||||||||||
Sbjct: 59 tcatgtgttctcaggtcgcccctgctga 86
>41667_vvi-MIR398c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 92 tcatgtgttctcaggtcacccctgctg 118
||||||||||||||||| |||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>41666_vvi-MIR398b:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 92 tcatgtgttctcaggtcacccctgctg 118
||||||||||||||||| |||||||||
Sbjct: 55 tcatgtgttctcaggtcgcccctgctg 81
>40382_rco-MIR398b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 90 tttcatgtgttctcaggtcacccctgc 116
||||||||||||||||||| |||||||
Sbjct: 96 tttcatgtgttctcaggtcgcccctgc 122
>41446_ptc-MIR398b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 ttcatgtgttctcaggtcacccctgc 116
|||||||||||||||||| |||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccctgc 77
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccctgctga 119
|||||||||||||| ||||||||||
Sbjct: 62 tgtgttctcaggtcgcccctgctga 86
>42039_osa-MIR398a:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 101 tgtgttctcaggtcacccct 120
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>41447_ptc-MIR398c:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 93 catgtgttctcaggtcacccctgc 116
|||||||||||||||| |||||||
Sbjct: 66 catgtgttctcaggtcgcccctgc 89
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccct 99
>41245_csi-MIR398:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 132 tgtgttctcaggtcacccct 151
>41191_aqc-MIR398b:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 93 catgtgttctcaggtcacccctgc 116
|||||||||||||||| |||||||
Sbjct: 70 catgtgttctcaggtcgcccctgc 93
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 125 tgtgttctcaggtcacccct 144
>41078_gra-MIR398:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>41059_ghr-MIR398:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 73 tgtgttctcaggtcacccct 92
>40479_gma-MIR398b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 96 tgtgttctcaggtcacccct 115
>40478_gma-MIR398a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcacccct 96
>40403_ahy-MIR398:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 129 tgtgttctcaggtcacccct 148
>40381_rco-MIR398a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccct 85
>40308_bol-MIR398a:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 71 tgtgttctcaggtcacccct 90
>40089_ath-MIR398a:mirbase
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 75 tgtgttctcaggtcacccct 94
>39881_aly-MIR398a:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tgtgttctcaggtcacccct 114
||||||||||||||||||||
Sbjct: 122 tgtgttctcaggtcacccct 141
