miRNEST 2.0, an integrative microRNA resource :: BLAST
>40091_ath-MIR398c:mirbase
Length = 115
Score = 212 bits (107), Expect = 5e-56
Identities = 113/115 (98%)
Strand = Plus / Plus
Query: 12 tggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctac 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctac 60
Query: 72 gtcattgttacagctctcatttcaagtgttctcaggtcacccctgctgagctctt 126
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gtcattgttacagctctcgtttcatgtgttctcaggtcacccctgctgagctctt 115
>40090_ath-MIR398b:mirbase
Length = 116
Score = 174 bits (88), Expect = 1e-44
Identities = 110/116 (94%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 12 tggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacgacgctac 71
||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct: 1 tggatctcgacagggttgatatgagaacacacgagtaatcaacggctgtaatgacgctac 60
Query: 72 gtcattgttacagctctc-atttcaagtgttctcaggtcacccctgctgagctctt 126
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 61 gtcattgttacagctctcgttttcatgtgttctcaggtcacccctgctgagctctt 116
>39883_aly-MIR398c:mirbase
Length = 132
Score = 129 bits (65), Expect = 6e-31
Identities = 118/132 (89%), Gaps = 4/132 (3%)
Strand = Plus / Plus
Query: 7 ggtagtggatctcgacagggttgatatgagaacacacgagcaatcaacggctat-aacga 65
||||||||||||||||||||| || ||||||||| | ||||||||||||||| | || ||
Sbjct: 1 ggtagtggatctcgacagggtcgacatgagaacatatgagcaatcaacggctgtaaatga 60
Query: 66 cgctacgtcattgttacagctctc-atttcaagtgtt--ctcaggtcacccctgctgagc 122
|||||||||||| ||||| ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 61 cgctacgtcattattacatctctcggtttcatgtgttaactcaggtcacccctgctgagc 120
Query: 123 tctttctctacc 134
||||||||||||
Sbjct: 121 tctttctctacc 132
>39882_aly-MIR398b:mirbase
Length = 142
Score = 115 bits (58), Expect = 9e-27
Identities = 111/131 (84%), Gaps = 12/131 (9%)
Strand = Plus / Plus
Query: 5 aaggtagtggatctcgacagggttgatatgagaacacacgagcaatcaacggctataacg 64
|||||||||||||||||||||||||||||||| ||||| | | ||||||||||| ||| |
Sbjct: 12 aaggtagtggatctcgacagggttgatatgaggacacatgtgtaatcaacggctgtaatg 71
Query: 65 acgctacgtcattgttacagctctcatttcaagtgttctcaggtcacccctgctgagctc 124
|||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 72 acgccacgtcattgtta------------catgtgttctcaggtcacccctgctgagctc 119
Query: 125 tttctctaccg 135
|||||||||||
Sbjct: 120 tttctctaccg 130
>40730_mtr-MIR398c:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 97 gtgttctcaggtcacccctgctga 120
||||||||||||| ||||||||||
Sbjct: 63 gtgttctcaggtcgcccctgctga 86
>40729_mtr-MIR398b:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 97 gtgttctcaggtcacccctgctga 120
||||||||||||| ||||||||||
Sbjct: 63 gtgttctcaggtcgcccctgctga 86
